F13732

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F13732

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Seed::deep red

Original: F13732

Determination of introduced cDNA(s)

RAFL09-34-G13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-34-G13 - Resource: pda06056

full reading [+] show sequence

CAATCGAACC CTATTCCTCA CTGACCCTGA CGTTTATGGC AGAGGAAGGA 
TTCATCGGAA TTGGAGAAAG CGAAGAAGAA GCGGCAGAGA TCGGCGCTTT 
CTCCTACAGC CACCACCAGA TCTCTGACCT GCGACGAAGA AGTTGACTGA 
AACAATTATT TGTTTCGTGG CTGGAATCCA TGGGGAAGGG CCCCTTATCG 
TTTCGCCGTC TTTCAAGCAT CCGTCACCGG AAAAAAGGTT CTGCGGTGAA 
GGATGACTCC GCACAGACAT CGACGCCTTC ATCTCCACCG CCTCCCCTAC 
CGATTCATGC TGGCGGATCG GCTGTGGGAG CGACGGGGAA GGCGAAGAAG 
AAAACCGGAG GAGCTAGGCT GTGGATGAGG TTTGATCGGA CTGGTGCTAT 
GGAAGTGGTG GAGTGCGATA AGAGTACAAT CATCAAACGT GCTTCTGTTC 
CCGCTAGGGA TTTGAGGATA CTTGGCCCTG TCTTCTCTCA CTCCTCTAAC 
ATTCTCGCCA GAGAGAAAGC TATTGTTGTG AATTTAGAGG TCATAAAGGC 
AATAGTTACT GCAGAAGAAG TGTTGTTGTT GGATCCTCTC CGTCCTGAAG 
TTCTTCCATT CGTTGAACGA CTAAAGCAAC AGTTTCCTCA GAGGAATGGG 
AATGAAAATG CACTGCAAGC TTCTGCGAAT GTACAATCTC CTCTTGATCC 
AGAAGCTGCA GAGGGTTTGC AGAGTGAGCT TCCTTTTGAG TTTCAGGTCC 
TGGAGATTGC ACTTGAGGTC GTCTGCTCAT TTGTTGATAA AAGTGTGGCT 
GCTCTTGAGA CAGAAGCTTG GCCTGTCCTT GATGAACTCA CTAAGAATGT 
CAGCACTGAG AATCTTGAAT ATGTACGAAG TTTGAAAAGT AATCTCACCC 
GCTTGCTAGC TCGTGTACAA AAGGTGAGAG ATGAACTCGA GCATTTGTTA 
GATGACAACG AAGACATGGC TGACTTATAC TTAACAAGGA AATGGATCCA 
GAACCAGCAA ACCGAGGCAA TACTGGCGGG TACAGCATCA AACAGCATTG 
CCCTCCCAGC ACATAATACA TCAAATCTTC ACCGGCTCAC ATCAAACAGA 
AGTGCGAGTA TGGTGACGAG CAATACAGAG GAAGATGACG TGGAGGATTT 
GGAGATGTTG TTGGAGGCAT ACTTCATGCA ACTGGATGGA ATGCGGAACA 
AGATTCTTAC AGTGAGGGAG TACATTGACG ACACAGAAGA CTACGTGAAC 
ATTCAACTGG ATAATCAACG AAACGAACTG ATCCAGCTGC AGCTGACGCT 
GACCATAGCC TCGTTTGCAA TAGCCGCAGA GACATTGTTG GCCAGCTTGT 
TTGGAATGAA CATACCATGT CCATTGTATA GCATACATGG CGTCTTTGGT 
TACTTTGTGT GGAGTGTTAC TGCACTTTGC ATTGTGCTTT TCATGGTCAC 
TCTTGGTTAC GCCAGGTGGA AGAAGCTGCT AGGCTCATAA TCTCCCTCTC 
TCTTACAAAC CATGTGCCAC TTGTGTAATA ATTTATACAT ATGTTACTGG 
ACAGAGTTGT TTCACTCATA TCTTGTCCAG TGAAGACGTT AGTGATTCAT 
ATATGTTGTT GAGGAACACA TGTAGATGGA AATGATATAA GAGTATATAT 
GTCG

Gene models with high sequence identity

AT3G58970.1 [+] show detail - magnesium transporter 6
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Mg2+ transporter protein, CorA-like	5.6e-10
HMMPanther	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	1.2e-135
Coil	coiled-coil	0
Coil	coiled-coil	0

See the detailed result >

AT3G58970.1

Model type: Protein coding
Short Description: magnesium transporter 6
Curator Summary: Transmembrane magnesium transporter. One of nine family members.
Computational Description: magnesium transporter 6 (MGT6); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transport 5 (TAIR:AT4G28580.1); Has 803 Blast hits to 784 proteins in 174 species: Archae - 2; Bacteria - 26; Metazoa - 66; Fungi - 194; Plants - 407; Viruses - 2; Other Eukaryotes - 106 (source: NCBI BLink).
Link: InterPro Scan - TAIR