F14245

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F14245

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F14245

Determination of introduced cDNA(s)

  • RAFL09-84-B14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-84-B14 - Resource: pda08916

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-84-B14 - full reading 
    AGATGTCTTT GACAGAGTAT TTCATATTAC ACGTGGTGGT ATCAGCAAGG 
    CCTCTCGGGT CATCAATATT AGTGAAGATA TATTTGCTGG TTTCAACACA 
    ACTCTACGTC AAGGGAATGT TACTCATCAT GAGTATATTC AGGTGGGCAA 
    AGGGCGAGAT GTTGGGCTCA ATCAAATAGC TCTGTTTGAA GGGAAGGTTG 
    CTGGTGGGAA TGGTGAACAG GTTCTTAGTC GAGATGTATA CAGACTTGGC 
    CAGCTCCTTG ATTTCTTCCG TATGATGTCA TTCTTCTTTA CAACCGTTGG 
    CTTCTATCTA TGTACAATGT TGACGGTGCT TACTGTGTAT ATTTTCTTAT 
    ATGGGAGGGC ATATCTGGCA CTTTCTGGAG TTGGAGCTAC TATTCGAGAA 
    AGAGCTATTC TTCTGGACGA TACTGCACTT AGCGCCGCCT TGAATGCTCA 
    GTTTCTGTTT CAGATTGGTG TCTTCACTGC TGTGCCAATG GTTTTGGGAT 
    TTATTTTGGA ACAGGGTTTT CTCCAGGCCA TCGTCAGTTT CATAACAATG 
    CAATTTCAGC TATGTACTGT CTTCTTCACA TTTTCCCTTG GTACAAGAAC 
    CCATTATTTT GGACGGACAA TTCTCCATGG TGGTGCAAGG TACCAAGCCA 
    CTGGAAGAGG CTTCGTCGTG AAGCATATCA AATTTTCTGA AAACTACCGT 
    CTTTATTCCA GAAGTCATTT TGTCAAAGCA ATGGAAGTTA TTCTTTTATT 
    GGTTGTGTAC CTTGCGTATG GCAATGATGA AGCTGGTGCG GTTTCCTACA 
    TCCTGCTGAC AGTTAGCAGC TGGTTTTTGG CTGTTTCTTG GCTGTTTGCT 
    CCGTACCTAT TCAACCCTGC CGGATTTGAG TGGCAGAAAG TCGTGGAGGA 
    CTTCAAAGAA TGGACAAATT GGCTCTTTTA CAGAGGTGGA ATTGGTGTGA 
    AAGGAGCTGA AAGCTGGGAA GCATGGTGGG AAGAAGAACT GTCTCACATT 
    CGGACCTTGA GCGGGAGGAT AATGGAGACT ATTTTAAGTC TACGATTCTT 
    TATCTTCCAG TATGGTATTG TCTACAAACT GAAGCTACAA GGATCAGATA 
    CATCATTTGC GGTGTACGGT TGGTCATGGG TTGCATTTGC AATGATTATA 
    GTTCTTTTCA AGGTCTTTAC CTTCAGCCAG AAGATTTCTG TCAATTTCCA 
    GCTTTTACTG AGGTTTATAC AAGGTCTATC CTTATTGATG GCTCTAGCTG 
    GCATAATCGT AGCAGTTGTG CTCACACCCT TGTCAGTGAC AGACATATTT 
    GCATGCGTAT TGGCTTTTAT ACCGACAGGA TGGGGAATTC TTTCTATTGC 
    GTGTGCTTGG AAGCCAGTCC TAAAGCGAAT GGGGATGTGG AAATCGATTC 
    GTTCCCTAGC AAGGCTATAT GATGCGTTAA TGGGAATGCT CATATTTCTT 
    CCCGTTGCTC TCTGCTCCTG GTTCCCTTTT GTGTCGACCT TCCAGACACG 
    TATGATGTTT AACCAAGCCT TCAGCCGCGG TCTCGAGATC TCTCTTATTC 
    TTGCAGGAGA CAATCCCAAT TCTGGTCTTT AAACTTTTGG AAGCTGTTAT 
    GTTTATGTTT TTCATACATT TATTTGTGTT TAGTTTTCCG AGTGTAGCAG 
    TAGTAAATGA TGGGAGCCTC TCTGTAGCTT TAGGCATTTT AAGACTTCTG 
    TAACATTTGT CCCCAAAAAA GAAAAGACTT TTGTAAAACA TAACCTAGAA 
    TCTTTAAGAT ATTACGTAGA AATGCCTTTC

    Gene models with high sequence identity

    1. AT3G07160.1 [+] show detail - glucan synthase-like 10
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G07160.1

    Model type
    Protein coding
    Short Description
    glucan synthase-like 10
    Curator Summary
    Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).
    Computational Description
    glucan synthase-like 10 (GSL10); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 8 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 8 (TAIR:AT2G36850.1); Has 1244 Blast hits to 899 proteins in 149 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 674; Plants - 491; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR