F14345

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F14345

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F14345

Determination of introduced cDNA(s)

  • RAFL04-16-F02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-16-F02 - Resource: pda00552

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-16-F02 - full reading 
    GTGTGATTTT CTAAGACTTG AGTAATCTTG TTTTCCGAAA TTTTCTCACC 
    AAGCTCGAAC ACAAAGATCG GCCATGGCTA CGCTCTTCAC CGTCGCTCGT 
    CCTTCTTCAC TCCTCTATGT TTCCTCCATA AATCCAAGCA AGACCTTCTC 
    TCCTTCTATC TCCCTAAAAC TTAACTCTCT CTCTTTCTCT TTTGGTTATC 
    GTCCCAAGCC ACTCCGGTTT TCTAAAATCC GATCTTCTCT GCCCTCGGAA 
    TCTGAATCGG AATCCGACCT AGATGCGTCT GCAGTTACAG ATGAATGGGG 
    TGAGAAACCT GGAGATGCAA ATGAGCCCGA CTCTCAGCCA GATAATGTGA 
    CCGTGAATGT GATTACGGAC GAATGGGGCG AGAAATCCGG ACCCGAACTT 
    GAGGAATCCG GGACCCGGTT TATGGAATCG GATCCTCCAA GGAACGAAGA 
    CGAGTGGGGA GGAGAAATTG GAGGAGAAAC TGAAGCCGAC GCTGGAAATG 
    GAAGTGCGGT GTCTGACCCG ACTTGGGAGC TGAAAAGGTG TTTGGCGGAT 
    TCGGTGTACG GAACTGAATT AGGTTTCAAA GCTGGGTCAG AAGTCCGAGC 
    GGAGGTTTTG GAGCTTGTGA ATCAACTGGA AGCTCTGAAT CCTACTCCGG 
    CTCCGTTAGA GAATCCAGAA CTTCTCGACG GCAACTGGGT TTTGCTGTGC 
    ACTGCTTTCT CTGAGTTGAT TCCTCTACTA GCTGCGGGTT CGACACCTTT 
    GTTGAAAGTT AAAAGCATAA GTCAGTCAAT AGACACAAAC AATCTCATTA 
    TCGACAACTC CACTACACTC TCCAGCCCTT TTGCAGACTT CTCCTTCAGT 
    GCTACTGCTT CATTTGAAGT TCGAAGCCCT TCAAGAATTG AGGTTTCTTT 
    CAAAGAAGGC ACGCTAAAAC CCCCGGTGAT CAAATCAAGT GTAGATCTCC 
    CAGAGAGTGT GGGCGTCTTT GGGCAGCAGA TTAGCCTTTC GTTGTTAAAG 
    CAGTCTTTGA ACCCCTTACA AGATGTGGCA GCAAACATTT CACGGGCACT 
    CTCTGGTCAG CCACCTCTCA AGCTTCCGTT TCCAGGAAAC CGAGGCAGCT 
    CTTGGCTCTT GACCACTTAT CTCGACAAGG ATCTCAGGAT TTCTAGAGGA 
    GATGGTGGCC TTTTCGTGCT TGCCAGAGAA GGAAGCTCTC TGCTTGAGCT 
    CTGAAATATT TGATAAAGTA TATATATAGC AGGCTTCATG TAAAAACCGT 
    AACCACTACA GTAGAGACAT CTTCAGAATA ATGCTGAATG CAGATTATTG 
    GGCCTAATCT TAAATTTTAA TTATGT

    Gene models with high sequence identity

    1. AT2G35490.1 [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
      E-value: 0; Score: 99.92

     

    InterPro Scan Digest

    See the detailed result >

    AT2G35490.1

    Model type
    Protein coding
    Short Description
    Plastid-lipid associated protein PAP / fibrillin family protein
    Computational Description
    Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 422 Blast hits to 421 proteins in 82 species: Archae - 0; Bacteria - 91; Metazoa - 1; Fungi - 0; Plants - 314; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR