F15751

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15751

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F15751

Determination of introduced cDNA(s)

RAFL09-39-N01 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-39-N01 - Resource: pda08305

full reading [+] show sequence

GTCTAAAAGA TTTCACAACT TTCGGTTTTG TCTCTAGGTG TATTATTCTT 
CATCCCAAGG GCTACCCTGG TTATGATAAT CACTTGTCTC TATTTCTGAA 
CGTACCTAAT CTTGAATCAT TGAGACTTGG ATGGAAAAGG AGAACTCGCT 
TTTTCTTCGT TATTTTGAAT CAATCCGGCA ACGAGCTCTG CAGATCCCCT 
AATGATCAAA GCTGTTTGTT CTGCGCTGAG GCTACACAAT GGGGTTTTCG 
GAAGCTGTTG CCGCTTACCA AGCTTCTAGA AGACCACGAC AACAACAAGA 
AACTAACCTT CCAAGTCCAC CTCGAAGTAG TCTAAGTTGT CCACCAAGGA 
CAATCAACTG AGAATGATAT ATTACAACAC AGAGGTCTCC CGATCCTTGC 
TTCTCAAGCT CTTTCATTTT CCAAAATTTT AAGTCGCCAC CCGGACTTTG 
AAGTAGATTT CGTGCCAAAG TACCAGGAGC TACTACCAGT GTACTTGACT 
CTCTTCTTCT GCCTCATCGA GACACTGAGC AAGTCTCCAC AGAGCTTGTC 
TGCGGATGAA CTAACCAATG CTCAAAACCA ACTGTCCGAG CTCACAAAAG 
TAGGCTTCAA GCTAGACTGG TTGAAGTCTA AGCTCGAGGA GCTTTCCTTG 
GAGAGGAAGA AAGCAGTTCC CGATGCTTGT CATGTCCTCC ACGAACGGGT 
CAAAAATGTG GAACTGACTT TGTCCAATCT CCAAGTTAAA CTGGACAAGG 
ACAGGATCAA ATATGCTGCT GCTGCTGCTG GAGTTTCTTC CTTTGGGTTC 
ATTGGTTTTT TTATCAAGAG ATTCGTTCTC TCTTGCTTCT CGGTCTGAAG 
AAAGTATGCA ATTTACCAAA CTCAACTTAT AAAGAATACA CAAAAAAAAA 
AAAAAAA

Gene models with high sequence identity

AT1G03580.1 [+] show detail - pseudogene, meprin and TRAF homology (MATH) domain protein -related, weak similarity to ubiquitin...
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
ProfileScan	MATH	0
superfamily	TRAF-like	3e-09
HMMPfam	MATH	0.016
HMMPanther	PTHR10420:SF29	1.79999754022378e-21
HMMPanther	PTHR10420	1.79999754022378e-21
HMMSmart	MATH	0.0339999972437717
HMMPanther	TRAF-LIKE AND MATH DOMAIN-CONTAINING	8.8e-22
HMMPanther	UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELAT	8.8e-22

See the detailed result >