F15908

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15908

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F15908

Determination of introduced cDNA(s)

  • RAFL02-08-E13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL02-08-E13 - Resource: pda02253

    full reading [+] show sequence

    Nucleotide sequence: RAFL02-08-E13 - full reading 
    AACGAAAGGG TTTAATGGCG ACGAGATTCG ATGTGAAGAC GATCGTCAAG 
    GACAAGAGAT TCTGGATTGC TTCCTTCATC ATCGTCTGGG CTGCTGGTCT 
    TCAGGGTCAC ATGATGTGGC TGCAGAAGCA AGAATCTTTC AAGCAGAAAT 
    TTGGAACAAT CGATGAAGAC GACCACAAGT GATTCATGAC TTTATTACGT 
    CTCTGAAACT GCTTTCTTTT TTTGTATTTG TGAGTCTTGA GGAAGAGTTA 
    GATTTGTATG AAATTTAATC ATACAGACTC TGGCTTACTA TCTCCAATGG 
    TTAATTTGCC AAATGCTAGT AGTTTTGATT GCTAGAGATG TCTCTGTATT 
    TTGAGATTTT ATAGTATTTC AGCTTGAGCT TT

    Gene models with high sequence identity

    1. AT2G39500.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 99.74

     

    InterPro Scan Digest

    See the detailed result >

    AT2G39500.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR