F16828

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F16828

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F16828

Determination of introduced cDNA(s)

  • RAFL06-78-K23 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-78-K23 - Resource: pda03740

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-78-K23 - full reading 
    ACAAATCCTT AATCTTTCTC TTCTTCCTAA AAACAGCTTT GAGCTTTCTC 
    TCAGATAACC ACATTTTACC TAACAATGGC TACAATCATC TCCTGCTCCG 
    CTCTTTCCTC GATCCGAGCA TCTTCCGAAT CGGATCCAGC CCGTAAGAAA 
    CCTGTTTCGT CGGTTTCATG GTGGGCTCCT CTTTTTGGCA TGTCATCGGA 
    ACCTGATTAC GTCAACAAAA CCGTGAATCT GGAATCAGAT CTGGATAAAG 
    CTGAAAAGAG GTCTCTGCGA TGTTGTCTCA CGGAGGAGAA GGCTAAGCAG 
    CTGCGGAGGA AAACCGCCGA AGCTTCTACA TTCCACGACG TTATGTACCA 
    TTCTGCGATC GCGTCGCGAC TCGCGTCTGA CGTTCGGGTC AAGAAGTAAC 
    TGGATCGGGT CACGGATCCA GAAATAATCA ATAATTCGTC GAACTTAAAA 
    TGTCTCTCTT TTATGGGATG AAGAATAACT TTTTGTTTAC GATGATACTC 
    AAGAACCGCT TTATTGTGCG GCGTCGTTTT CTGTTTGTAC GGTCTGGATC 
    GTGTATGATG TTGCTTTATT GTGAACCGTT GGATCATTAG TTAGTTTAGC 
    TTTTTATTTG TTGTCAGTTG TTAATGCTTT TTTTTTTTTT TCCTCAGTTG 
    TTAATGCTAA CTGTTGGATC GGTAGATATG TTCAACACGT ATAAAGATT

    Gene models with high sequence identity

    1. AT3G15630.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 99.86

     

    InterPro Scan Digest

    See the detailed result >

    AT3G15630.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR