F17127

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17127

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17127

Determination of introduced cDNA(s)

  • RAFL06-83-N20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-83-N20 - Resource: pda07727

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-83-N20 - full reading 
    AGATGCAGTC TTCTTCATCA ATGGAGGTTT TTGATTCGCC CCAAGCTCTC 
    GCGATTCCTG ATGTTCTTCA GTAATTTCTT GCAATCCTTA TAAACAAAGA 
    GCGTGGAGAA TCGTTTCAGA GGAAAGAAAA CTAAAAATGG CGACTCTTTT 
    CAACAAATTT CAGCAGGCTG TTGGAGTTCT TGCCAAGAGT ACCACATTTG 
    CTAAGAACCC AAGGCAACTG CAGTTTGAAG CAGACGTTAA CAAACTCTTT 
    ATGTATACAA GCTATAACCG GTTGGGACGA GAAGCTGAGG AGACTGATGC 
    AGAGGAGATC ATTGAGATGG CTGGTAAAGC CACTTTATCT GAGCAGCAGA 
    AGCAAGTTCA AGAGAACATT CACTACCAAG TTGAAAAATT CTGCTCTTTG 
    ATGGATGGAA TCCTTCTTCC TGATGTTAGG AGGAACGAGT CGGGGTCACA 
    ATCAACAAGC CCTCGTCCTC CTCGTAGAAG TGGTCTTACT TTCGCCATTG 
    GTAGTAATAA TGCTTTTCCA CATGCAGATC AGCCCCTTGT TCCCGAGACA 
    AAGCCTTTGA AACTCAATGA CGTCTCACAG AGATTAATGG ATCAAATGGG 
    TTACACCCTC GAGACCAAAC CGTCTGTAAT ACCTCACAAA GACGCTGGTC 
    AAGGTTGTTT TATCAAAGGC GAGGCAGATG TTGGAACCGT CTTAGCCTTT 
    TACCCTGGAG TTATTTACTC TCCTGCTTTC TACAAGTACA TACCCGGGTA 
    CCCGAAGGTT GATTCACAGA ACTCATATCT CATCACCAGG TATGATGGGA 
    CTGTAATAAA TGCTCAACCT TGGGGTCTTG GGGGAGAATC AAGGGAAGCA 
    TGGAACGGGT CCTACACACC TGCGGTCAAA GCAAACACCA AAACCGCAGA 
    AAACGGGTCA GACAGGTTAT GGAAAGCGTT GAGCAAGCCT CTCGAAGGTT 
    CGGGTAAAGG AAAAGAGGTT CTTGAGAGGA GAAATCCGTT GGCTTTTGGT 
    CACTTAGCTA ACCACCCAGC GAAAGAGATG ACTCCAAACG TTATGATATG 
    TCCTTATGAC TTCCCTTTGA TGGCGAAAGA TCTGCGGCCT TACATTCCGA 
    ATATATCTTT TGGGGATTCT GGAGAAATAA AGATGAAAAG ATTTGGAAGT 
    TTCTGGTTTA AGACAGGGAG TAAAAACGGG TTAGAAGCTC CGGTTCTGAA 
    GACACTGGTC TTGGTGGCAA CGAGGTCGTT GTGTAATGAG GAACTTTTGC 
    TGAATTACAG GCTGAGCAAC TCTAAGAGAC GACCAGATTG GTATACTCCG 
    GTTAACGAGG AGGAAGATAG GAGAAGATGG AGCTAAATTT CTCTTTTATG 
    TTTTAATGAA ACTTGAAAGG CTCTGTTTCA AAACATGCTC CTCGGTTTTC 
    TTTAGACTAT TAGCGGGACG TCGTTTCGCT GATTGTGTCA CTATTTTTGT 
    TTTTCGATTA TTTTTGGAAG ACATTTTATT CTAATATTTT ATGTTGTTCT 
    GTTGTTACAT ACAAAAAAAA AAAAAAAA

    Gene models with high sequence identity

    1. AT5G23200.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G23200.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR