F18333

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18333

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F18333

Determination of introduced cDNA(s)

  • RAFL09-32-O04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-32-O04 - Resource: pda05964

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-32-O04 - full reading 
    GGAACAAGAA ACAGTAAGAG AACTTATAAA TAGAGAAGGC TATATGGGGA 
    ATTGTGCACT AAAGCCAAAA GTTCTGTCAG AAACCGGAGC TCCGGCGCCG 
    GAGGAGCTCA AGGATTCACT TCTTGAATAC CATAAGATGG ACGCTGCAAA 
    ATCTCTTAGC AACTTGTTCC TTCAAGACAA GGCAGATAAG ATAACGAAAG 
    AAGACGAGAA GATCACACCG GAAAAGATAC CGGTTACTGA TGATCTGAAA 
    ACAGCTTTGG AGGAGGAAAA TACTCCGACC AAAGAGGCAA AATCTCCGGC 
    AACAGAGACA AAGTATTCGG TAACAGAGAA AAGAGCTCCG GCTGACAAGA 
    AGATAACACC GGAAATGATG CCGGTTACTG AAGATCTGAA AACAGTTTTG 
    GAGGAGGAGG CAAAACCTCC TGCAACAGAG ACAAAAGCTA TGGTTGATGA 
    TCAGAAGGTG AAGAACGAAG TGGCCGTTCG TGAAGAGAAA ATCATTGACC 
    TCGTGACTGT GAAAGAGAAC GAAACAGAGG CGAAAACAGA GTAGGTGGGA 
    AAAGAATAAA CACAGTGAAA CAGCCTTGAA ACGCTAGTTT CTGCGTTCTT 
    GATAGCAAAA TGCTTGTTTT TGTTTAGATT ATATTTTTCC TCGATAGATA 
    AACGCAAACG CTGTATTCTT TATATGAATT GAAAACTTCA AATTTCC

    Gene models with high sequence identity

    1. AT4G39320.1 [+] show detail - microtubule-associated protein-related
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G39320.1

    Model type
    Protein coding
    Short Description
    microtubule-associated protein-related
    Computational Description
    microtubule-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR