F20545

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F20545

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F20545

Determination of introduced cDNA(s)

  • RAFL05-14-I08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-14-I08 - Resource: pda02597

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-14-I08 - full reading 
    TGAACAACAA CAAAGCAAAA ACACTCCCAA ACCAAAAAAA GAAGAAGAAG 
    AAGCTAAATT CGAATCTCTC TCTTTTTTGA AATATGGCTT TTTCCAAATC 
    TCTAGTGTTT GTTCTTCTCG CTGCTCTTTT GATTTCTTCC GCAGTGGCTC 
    AATCTCCGGC TCCAGCTCCA TCTAACGTCG GAGGTAGACG GATCTCACCG 
    GCTCCTTCAC CTAAGAAGAT GACTGCTCCT GCTCCTGCAC CTGAAGTTTC 
    TCCTTCTCCT TCTCCGGCAG CCGCATTGAC TCCAGAATCC TCTGCTTCAC 
    CACCATCGCC GCCTCTAGCT GATTCTCCTA CCGCTGACTC CACGGCTTTG 
    TCTCCATCTG CGATCTCCGA TTCTCCGACT GAAGCTCCTG GTCCTGCTCA 
    GGGCGGCGCC GTTTCGAACA AATTCGCCAG TTTCGGATCT GTGGCGGTTA 
    TGTTAACTGC TGCCGTTTTG GTTATCTAGG TTGTTCCGAT CAATGAAGCT 
    TCTTTGATTT TATTTATTTA TTTTAGATAT ATTAGAGTTT TGTGAGAGAG 
    ATGATGATTC ATTATTTTTC TCTTCTTTCT ATTATTTTCT TTGAATATTT 
    TTCTTTCTTC GGCTGATCCT ATGCGCGTTT GTATCTATCC AATATTTATC 
    TATCTATATG ATTTATCAGA TTTTCC

    Gene models with high sequence identity

    1. AT5G64310.1 [+] show detail - arabinogalactan protein 1
      E-value: 0; Score: 99.85

     

    InterPro Scan Digest

    See the detailed result >

    AT5G64310.1

    Model type
    Protein coding
    Short Description
    arabinogalactan protein 1
    Curator Summary
    Encodes arabinogalactan-protein (AGP1).
    Computational Description
    arabinogalactan protein 1 (AGP1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR