F21721

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21721

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21721

Determination of introduced cDNA(s)

RAFL19-77-M04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL19-77-M04 - Resource: pda11579

full reading [+] show sequence

ATCGAATAGT CGAAAAATAT TTGAACTTTC TTAGGAAACC AAACCAACAA 
AACAAAAAGG AAAACGAGAT AATGGTGTTA CCTTGGAGAT CAAGAGGAGG 
AGTAGCAAAG AGACGTAATC AATTGATTTC CGGCGATATC TCCGTCGTGG 
AAACCAAGAT TCCAGTTCAA CTCCGATCGC CATCAAGGAT AGAGCGGATT 
CAGTCACCGC GCGTGCTGTT GACGCCGCGT GATGCGGTGG AGATAAGTCG 
GAGATTGCAA AACGCAGCGG CGCGTGAGGA GTATGCCGAG TGTTTGGAGA 
TTGTGAGCAA AATCAAGAAC TTGGGAAGAG GAGGGGACAC GAACAAGAAG 
TGTTTGGTCC AAAACGGAAG CGTTTTGGCT TTGTCTTCTT GTTTTGAAAG 
ATTCGCGGCG GCGCGTGATG GACACATGCG TTTATTGGAG GAAATCTTGT 
TTGTTCTATC ATCTTGGTTG CCTCTGAATC GATCAGAAGG TTTCAACAAG 
ATGGGATCAA CGGCTTCTCT TAACTGTCTC GTACGGTTCT TGAACGGTAA 
GGACGCTAAA ACGAGACAAA ACGCTGCGTT TTGCATCAGA GAGGTTATTG 
CAGTAGACAA GAGGTATGTG TACGCGTTAA CAGATGTGGA AGGAGCTTGT 
GAAGGATTAG TTAAGATCAT CAGAGACTCT GTTTCGACTA GCTCCACGAA 
AGCATCTTTA ATGGTGATTT ATAGAGCGAT TTCTTCTAAC GACAAGATCA 
CTGAAAAATT TGTGAAACTG GGTTTGGTTG AGTTGATCAC AGAGATGATG 
GTGAACAATG CCGAAAAGAG CGTTTGCGAG AGATCTCTAG TTGTTTTAAA 
CGCTACATGC GATAACGAGC AAGGCAAAGA AGATGTTCTT AGAAACGCTT 
TGATCGTTCC TCTTCTGGTG AAGAAGATTC TTAGAGTTTC GGATCTCGCG 
ACACAATGTT CGGTTTCGAT ACTTTGGAAG CTATGGAAGA ATAAGAAAGA 
CGGAGAATGT GATGATCGTT TGTTAGTTGA AGCTCTTCAA GTTGGTGCCT 
TTGAGAAACT CTTAGTGCTC TTACAAGTCG GGTGCGAGGA TAAGACGAAG 
GAGAAAGCGA GCGAGCTCTT GCGGAATTTA AACCGTTGTA GAAACGAGAT 
CGAGAAGACA AATTGTGTCG ATTCTTCAAT GCATTTGAAG AATGTGAAGA 
AATCATTTTA GTCAAACAAA CAAAACACAC TATTATTCTT TGTAATTACT 
CTGTTTCTAA ATAAACTGAT TTTTCG

Gene models with high sequence identity

AT3G02840.1 [+] show detail - ARM repeat superfamily protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
Gene3D	Armadillo-like helical	2.7e-12
superfamily	Armadillo-type fold	1.3e-26

See the detailed result >

AT3G02840.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to other organism, response to ozone; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G37490.1); Has 423 Blast hits to 423 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 422; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR