F25335

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F25335

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F25335

Determination of introduced cDNA(s)

RAFL05-09-N10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-09-N10 - Resource: pda01121

full reading [+] show sequence

ATTGATTCAC TCACAAAGAA AAGATCATTG ATTCACACAC ATTTTCCTTT 
TTTGTTGTTA AATATTCACA CACACTTTTT CTTCCAAAGA AAGAAAGATG 
CCGATTAGCC GGAGAGTTCT GACGCCGATC ACCGCCGCTC CGGTTATCTT 
AGCCGTCCTT TGCTTCTTCT TTTGGTCATC AATCATCGGG CCGGACAATT 
TAAAGGGCAC GAAACACGTC CTTCAAGATG CTAAGACCAT TCCTCTTCCC 
GTCGATGGAC CAGAGAGCCT AGAGTTCGAT CCACAAGGTG AAGGCCCTTA 
CGTTGGCGTC ACCGACGGTC GCATTCTCAA ATGGCGCGGT GAAGAACTCG 
GCTGGGTCGA TTTCGCCTAC ACTTCTCCTC ACAGAGATAA CTGTTCGAGT 
CATGAGGTAG TACCAAGTTG TGGGAGACCA TTGGGACTTA GCTTCGAGAG 
GAAAACAGGA GATTTGTACA TATGTGATGG TTACTTTGGG GTCATGAAGG 
TCGGACCAGA GGGAGGCCTG GGCGAGTTAG TTGTTGATGA AGCCGAAGGT 
CGTAAAGTTA TGTTTGCCAA CCAAGGGGAT ATAGACGAAG AGGAAGATAT 
TTTCTACTTC AATGATAGCA GCGATACATA CCATTTCAGG GACGTATTTT 
ACGTGTCTTT GTCCGGGACA AAGGTTGGAA GAGTAATTAG ATACGATATG 
AAGAAGAAAG AGGCCAAAGT TATTATGGAC AAACTTCGTT TACCAAATGG 
TCTAGCTCTA AGCAAAAACG GTTCGTTTGT AGTCACATGC GAGAGTAGTA 
CGAACATTTG CCATAGAATA TGGGTCAAAG GTCCCAAATC CGGAACCAAC 
GAGGTTTTCG CAACGCTCCC TGGTTCCCCG GACAATATCC GGCGTACGCC 
AACAGGCGAT TTCTGGGTCG CATTACATTG CAAAAAGAAT TTGTTCACAC 
GTGCAGTTTT GATTCACACT TGGGTCGGAA GGTTTTTCAT GAACACGATG 
AAGATGGAGA CTGTAATTCA TTTCATGAAC GGAGGAAAAC CTCATGGAAT 
TGTCGTGAAA CTCTCTGGAG AGACAGGAGA GATTCTTGAG ATACTTGAGG 
ACAGTGAAGG GAAGACGGTG AAATATGTTA GTGAGGCTTA TGAGACAAAA 
GATGGAAAGT TATGGATCGG ATCTGTGTAT TGGCCGGCCG TTTGGGTTCT 
TGATACATCG GTTTATGATT CCATATGAGT TAGCCAAAAG ACCAAACGCC 
AAAATGAAAT AAATTATCAC TTAGTTGTGT AATTTGTTTA TTAGCGGGAA 
TGCATCTTGT TTTTGTATCT TCTTGTTTGT TGCGTGAGTG AATTATATAT 
GATGTAAACT TGGATTCTAC AAAATTTTGT TTGAAGTTGA GAAAAAAAAA 
AAAAAAA

Gene models with high sequence identity

AT3G57010.1 [+] show detail - Calcium-dependent phosphotriesterase superfamily protein
E-value: 0; Score: 99.93

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Strictosidine synthase, conserved region	8.4e-29
HMMPanther	STRICTOSIDINE SYNTHASE	1.1e-205
HMMPanther	Strictosidine synthase	1.1e-205
Gene3D	Six-bladed beta-propeller, TolB-like	6.6e-38
superfamily	Calcium-dependent phosphotriesterase	6.3e-50

See the detailed result >

AT3G57010.1

Model type: Protein coding
Short Description: Calcium-dependent phosphotriesterase superfamily protein
Computational Description: Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57020.1); Has 984 Blast hits to 970 proteins in 187 species: Archae - 1; Bacteria - 187; Metazoa - 221; Fungi - 0; Plants - 480; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Link: InterPro Scan - TAIR