F27413

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F27413

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F27413

Determination of introduced cDNA(s)

  • RAFL17-40-J21 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL17-40-J21 - Resource: pda10752

    full reading [+] show sequence

    Nucleotide sequence: RAFL17-40-J21 - full reading 
    ATTTCTCATA AAACAAAAAT TCGAGACCTC CTCTCCACTT CGAAATTTCA 
    TTTTTTTTTT CTCAACAGAG TAAATTTGGC TCTTATGCAC CTGTCGTGTG 
    AATCCTGATC TCGCTTTAGA TTGTGGAAGC CTTCGACACA TTTCCCATTT 
    TGAATTTGTC TTCTTCTTCT TCTTCCTTTA GTTTTTGGGG ATATTTCACC 
    ATCCTCGTTG AAATCAGTGT GATTCTTCTT CGTATACAAT GACGAAATTG 
    AGATCGAAAT GGTTAGGTTT AAGATCTGTA ACCATCTTCT TAATCAATTT 
    CTCTCTAGCT TTTGCTTTCG TTTCCGCTGA GAGAAGAGGA AAATCTCTGA 
    GGTTAAGTAC AGACGAAACG CGGGAAAATG AATCAAGTTT CTTCCTTAAA 
    GCTATCAATT TTCTATGGGA ATCTGATCAA ATAGGTTATC GTCATGTTTG 
    GCCTGAATTT GAGTTTAATT GGCAAATTGT ATTGGGAACA CTTGTTGGAT 
    TCTTTGGAGC TGCGTTTGGT AGTGTAGGTG GTGTTGGTGG TGGTGGGATT 
    TTCGTACCTA TGCTTAGTTT GATTATTGGG TTTGATCCTA AATCAGCTAC 
    AGCTATTTCA AAATGTATGA TTATGGGTGC TTCTGTGTCC ACTGTGTATT 
    ACAATCTTAG ATTGAGGCAT CCAACACTTG ACATGCCTAT CATTGATTAT 
    GATCTCGCTT TACTGATCCA GCCTATGCTT ATGCTTGGGA TTAGTATTGG 
    TGTTGCTTTT AATGTGATTT TTCCAGATTG GTTGGTTACA GTTCTACTCA 
    TCGTCCTCTT TCTTGGCACG TCAACAAAGG CGTTCTTGAA GGGTTCTGAG 
    ACTTGGAACA AGGAGACTAT AGAGAAAAAG GAGGCTGCTA AACGTTTAGA 
    GTCAAATGGT GTATCTGGCA CAGAAGTGGA ATACGTGCCT CTTCCCGCAG 
    CCCCGAGCAC GAACCCTGGA AACAAAAAGA AAGAAGAAGT AAGTATTATT 
    GAAAATGTAT ACTGGAAGGA ACTGGGACTT CTCGTGTTTG TCTGGATTGT 
    GTTCCTGGCG CTGCAGATAT CCAAGCAAAA TCTGGCTAAT TGTTCAGTAG 
    CATATTGGGT CATAAATCTG TTACAGATTC CGGTTGCAGT TGGTGTATCA 
    GGCTATGAAG CAGTAGCTTT GTACCAGGGT AGAAGAATCA TTGCGTCTAA 
    GGGACAAGGA GACTCGAATT TCACCGTTGG TCAGCTTGTT ATGTATTGTA 
    CATTTGGCAT AATAGCAGGC ATAGTCGGTG GTTTACTTGG TTTAGGCGGA 
    GGTTTCATCA TGGGTCCATT GTTCTTGGAG CTCGGTGTCC CACCACAGGT 
    CTCAAGTGCC ACAGCCACTT TTGCAATGAC TTTCTCATCA TCCATGTCTG 
    TTGTAGAATA CTATCTTCTC AAACGATTCC CTGTTCCATA TGCTTTGTAC 
    CTTGTGGGAG TGGCAACAAT TGCAGCTTGG GTTGGACAGC ATGTAGTCAG 
    AAGGCTAATC GCAGCCATCG GCCGCGCATC TCTCATCATC TTCATCCTCG 
    CGTCCATGAT CTTTATCAGT GCGATATCGC TTGGTGGCGT GGGAATAGTG 
    AATATGATCG GCAAAATCCA ACGGCATGAG TACATGGGTT TCGAGAACCT 
    TTGCAAGTAC GGTGGCTGAC GTTGTACTTA GCATGTAGCT TGTTAAGTGT 
    TAAACTTATA AAGCTTCATT CTTGATGGCA AGACTTATGG TCTTTTGATT 
    GTGTCTTGTG TCATTTTTTA AATTTGAAAA TCGAATTGTA TAATTACTAC 
    TTACTTAGTA GTAGTGGTAC TAATTTTTTT CTTTTCTTTT TTGGCTGAAT 
    TATGGTTGGA AATCTAATCT ATGTCAATAT AAGTGATTGA TC

    Gene models with high sequence identity

    1. AT2G25737.1 [+] show detail - Sulfite exporter TauE/SafE family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther ATP-DEPENDENT PROTEASE (CEREBLON) 1.3e-71
    HMMPfam Protein of unknown function DUF81 9.9e-22

    See the detailed result >

    AT2G25737.1

    Model type
    Protein coding
    Short Description
    Sulfite exporter TauE/SafE family protein
    Computational Description
    Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G36630.1); Has 3417 Blast hits to 2961 proteins in 724 species: Archae - 129; Bacteria - 1927; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 1163 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR