F30515

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F30515

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F30515

Determination of introduced cDNA(s)

RAFL09-43-M23 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-43-M23 - Resource: pda09786

full reading [+] show sequence

ACACGCGCGA CTTCTCTCTC TTCTGAAGCA CTCAAAGAGT AAAGTTTCTC 
TGCATTTCAG CTTCTCTCTC TCTTCTCTCT GTAGAAATGG CGGGTCGGAT 
CCAATCCCAC CAGCTACCAA ATGGACTCTA CGTATCGGGA AAGCTTGAGC 
AACCAAAAGA GCGACCACCG ACAATGGCGG CTCGAGCTGT GCCTTACACC 
GGAGGCGACA TCAAGAAATC CGGCGAGCTC GGAAGGATGT TCGACATCTC 
CGTCGTCGAT TCAGCTTCTT TTCAAGGACC ACCGCCGTTA ATCGTCGGTG 
GTAATAGCAG CGGAGGTACG TCAAGGCTTC AGGCGCCGCC ACGTGTCTCC 
GGTTCTTCTT CAAACCCTAA CAGTGGATCC GTTCGATCTG GTCCCAACTC 
TGGTTCGGTT AAGAAATTCT CAGGTCCACT CTCTCAGCTT CAGCCAACCG 
GTTTAATTAC CTCCGGTTCT CTTGGTTCTT CGGGTCCAAT TTTGTCCGGG 
TCTAGAAGGT CGGGTCAATT GGATCACCAA TTGAGTAATC TAGCGTCGAG 
CAAGCCTAAA TACGGGTCGT CGGTGACGAG TCTTAACGTA GACCCGGTTC 
GGGTCGGGTT TAAAGTACCA AAAGCAATGG TTTGGGCGGT TTTGATAGTG 
GCGGCGATGG GATTGCTTGT GGGAGCTTTT CTTACTGTGG CGGTGAAGAA 
ACCGGTGGTG ATTGCTGCGG TTTTAGCAGC AGTTTGTCCT GCAATCGTGG 
TTTTGGTTTG GAATTGCGTT TGGAGAAGAA AAGGGTTGTT GAGTTTTATC 
AAAAAGTATC CAGATGCTGA GCTTAGAGGT GCCATTGATG GACAATTCGT 
TAAGGTTACA GGGGTTGTGA CATGTGGAAG CATTCCTTTG GAATCTTCGT 
TCCAAAGAAC ACCAAGATGC GTTTATGTAT CCACGGAGTT GTATGAATAC 
AAAGGTTTTG GTGGGAAATC CGCAAACCCA AAACATCGAT GCTTTTCTTG 
GGGATCTAGA CATGCAGAGA AATATGTGTC GGATTTTTAC ATCTCGGATT 
TCCAATCTGG ATTGCGAGCA CTAGTAAAAG CAGGATATGG ATCAAAAGTT 
TCTCCTTTTG TCAAACCGGC GACAGTGGCT AATGTAACAA CGCAGAACAA 
AGATTTATCT CCCAGCTTCT TAAAGTGGCT GTCAGATCGC AACCTCTCAG 
CTGATGACCG TGTTATGCGT CTCAAAGAAG GATACATAAA AGAAGGAAGC 
ACAGTGAGCG TGATGGGGAT GGTAAGAAGG CACGACAACG TTCTGATGAT 
AGTTCCTCCG GCAGAAGCAG TCTCCAGTGG GTGCCGGTGG TGGCACTGCC 
TCTTCCCAAC CTACGCAGAT GGCTTAATCA TAACCTGCGA CGATAATCAA 
AACGCTGATG TCATTCCTGT CTGAAACCAA TATGTATGTA ATGCTTCTTT 
TGCCCGATAT TCAAATATAA AAATGCTTAA ACAGTTAGGC TCACGAGACT 
GAAGGAAGGA AGAGAAGAGA AGAGAAGAGA GGGAATGAGA GGACAGCCAA 
ATTGGTTCAA AAAGAAAACC AAATAGGCTT TGCCTTTTAC CTTATTAGCT 
TTTGTTTTTC TTTCTTAATT CTGTTTTTTT TTTTGCCCCT TGTATGGGGT 
TTATGTTTGT GTACATAGAG CCCCAAAGTG TAAATGCTCT TTTCTGTTAA 
AATAATTATT ATGTCTT

Gene models with high sequence identity

AT4G22290.1 [+] show detail - Ubiquitin-specific protease family C19-related protein
E-value: 0; Score: 99.94

InterPro Scan Digest

Program	Description	E-value
HMMPanther	gb def: Hypothetical protein (At4g22290)	2.6e-189
HMMPanther	UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELAT	2.6e-189

See the detailed result >

AT4G22290.1

Model type: Protein coding
Short Description: Ubiquitin-specific protease family C19-related protein
Computational Description: Ubiquitin-specific protease family C19-related protein; BEST Arabidopsis thaliana protein match is: Ubiquitin-specific protease family C19-related protein (TAIR:AT1G78880.1); Has 147 Blast hits to 147 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR