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GT13708

CSHL Arabidopsis genetrap mutant lines

Original: GT13708

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13708

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11782901 [Map]; Strand: w
      • AT4G22285.1 - [+] show detail - Ubiquitin C-terminal hydrolases superfamily protein
        Distance: -221; Region: promoter
    Flanking Genome Sequence: GT13708 - 5-prime edge 
    TTCCTCCTAC TTTATCCCTG CATGCACCTA TTGAAGAGAG CCTAAGGTTT 
    CCTTGGTGGA TAAGAATAGT GGATATGACA TAATAATTAT TTTAACAGAA 
    AATAGCATTT ACACTTTGGG GCTCTATGTA CACAAACATA AACCCCATAC 
    AAGGGGCAAA AAAAAACCGG ATTTAAAAAA AAAAATTAAA ACCTATTAGG 
    GCAAAGGGCA AACCCTTTTT GGTTTTCTTT TTAAACAAAT TGGGGGGCCC 
    TCTCTTCTCT TCCTTCCTTA AGGCCGGGGA GCCAAACTCT TCCTCCCTTC 
    CCTCCCTCCC

AT4G22285.1

Model type
Protein coding
Short Description
Ubiquitin C-terminal hydrolases superfamily protein
Computational Description
Ubiquitin C-terminal hydrolases superfamily protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: Ubiquitin C-terminal hydrolases superfamily protein (TAIR:AT4G22350.2); Has 3604 Blast hits to 3114 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 2060; Fungi - 575; Plants - 445; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).
Link
InterPro Scan - TAIR