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GT13837

CSHL Arabidopsis genetrap mutant lines

Original: GT13837

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13837

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5169159 [Map]; Strand: c
      • AT1G14990.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -895; Region: promoter
      • AT1G14990.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -916; Region: promoter
      • AT1G15000.1 - [+] show detail - serine carboxypeptidase-like 50
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13837 - 3-prime edge 
    ATAACTGGGA GAGAGCTACG CCGGGAAGTA CGTTCCAGCC ATTGGATACT 
    ATATCCTTAA AGAGAAACCC AATGGGAAAG TGAATCTAAA GGGGCTAGCC 
    ATTGGAAACG GGCTGACCGA CCCGGTGACC CAGGTTTCAA CCCATGCGGT 
    CAACGTCTAC TACTCGGGGT CTGGTCACG

AT1G14990.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14990.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages.
Link
InterPro Scan - TAIR

AT1G15000.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 50
Computational Description
serine carboxypeptidase-like 50 (scpl50); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3616 Blast hits to 3489 proteins in 407 species: Archae - 0; Bacteria - 288; Metazoa - 703; Fungi - 860; Plants - 1378; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).
Link
InterPro Scan - TAIR