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Mutant Lines
GT13909

GT13909

CSHL Arabidopsis genetrap mutant lines

Original: GT13909

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13909

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 29436978 [Map]; Strand: w
- AT1G78240.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  Distance: -494; Region: promoter
- AT1G78240.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  Distance: -407; Region: promoter

TTTACCGACC GTTACCGACC GTTTTCATCC CTAGATACAT CTACCTTAAA 
AAAGATCATT AACTTTTCTA CATAAAAAAA AAACAATCCC CGAAAAAAAA 
AATCTTTTCC TCCCGACAAA ATACCCTTTA GGAAATCCCT GGTTGGACCT 
AACCCTTTTT TTCACCCGGT TCTTTATTTC TTTAAAGGTC AAAAACCTTT 
TTTTGAACTT CTTCAAATTT TTTGGGCCAC CTCCTCCTAT AAAGCTTCTT 
CTATTTTTTC AACCGCCCAT TTGGGGAATT TATTTAAAAA AAAAAAAGGT 
TGGTTTTTTT GCCCCCCCAA AATTTCTTTT TTTTTTTGGG AAAAAAAAAA 
AAAACAAAAA GAGGGGTAAA AAACTTTAAA AAATAAAAAG AAAACAAAGG 
GGGACCTTAA TCCATTTTTG GTCCTGGTAT TTGGCGGTAA ATGGTCCTAT 
TTAGACTTGT CCCCTGGGGA AGCTTCCCTT CTTTCCCCCC CCTAAAAACC 
CCTAAGGCTT CCCACCAAAT TTCCCCTCTT TTTTTTGTTT ATATCCCAAA 
CCCAACGAAA GGGTTCCTAA ATCCTTTTTT TGGTGGTTTG GGTTAAAATT 
ATCCGGGGCC CCCCGGGCGG GGCCAAATTG GGACCCAAAC AAAATTTGCA 
CAACCCCGGT TTTTCCCCTC TCCCC

5 prime edge [+] show sequence

Chromosome: 1; Position: 29437057 [Map]; Strand: w
- AT1G78240.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  Distance: -573; Region: promoter
- AT1G78240.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  Distance: -486; Region: promoter

CCTGGATGTA TCGAGCTTGT TTTATACCGT CAATGGAATT TATATAAACA 
TCATAAAGTT TAGTGGAAAC AAAACATCAT GATTATGACC AAAAGAATCA 
TGAATATAGA AGGTACAATA TGGGTGTTTT GGATGCAGAT CTGAATGTGT 
AAAAATGTTG ACTTTGTAGT TTATTCATCA AATTTTGAAC TGTTTAAAGG 
AGGACAAAAA ACACATGATC AAATTCCATG AGAAAAAAAA TGGTCGGTTT 
AGGCCAAGTT CCTCTCGCAA GAAAACGAGT GATCGTCCCC TAATTGGAAT 
AAGACGAGTT TCTTCACAAA TGTCCTCGAT TTGGTTTTGT TTTTTTACAC 
TCATCGATTT GGTTAATTTA TCTTCATCTC ACTCGACA

AT1G78240.1

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator Summary: Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development.
Computational Description: TUMOROUS SHOOT DEVELOPMENT 2 (TSD2); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: shoot development, homogalacturonan biosynthetic process, response to cytokinin stimulus, root development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 1228 Blast hits to 1207 proteins in 172 species: Archae - 9; Bacteria - 218; Metazoa - 0; Fungi - 44; Plants - 919; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G78240.2

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator Summary: Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development.
Computational Description: TUMOROUS SHOOT DEVELOPMENT 2 (TSD2); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: shoot development, homogalacturonan biosynthetic process, response to cytokinin stimulus, root development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3); Has 1228 Blast hits to 1207 proteins in 172 species: Archae - 9; Bacteria - 218; Metazoa - 0; Fungi - 44; Plants - 919; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link: InterPro Scan - TAIR