1. Home
  2. Mutant Lines
  3. GT14304

GT14304

CSHL Arabidopsis genetrap mutant lines

Original: GT14304

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14304

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17694179 [Map]; Strand: w
      • AT4G37650.1 - [+] show detail - GRAS family transcription factor
        Distance: 419; Region: intergenic
      • AT4G37660.1 - [+] show detail - Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family...
        Distance: -1317; Region: intergenic
    Flanking Genome Sequence: GT14304 - 5-prime edge 
    ACAGCTACTT TGGTTAGGGA ATCTCTTACT TGGAATCTCG TGAATGCACC 
    TCTAGTGGCT TGCACGCTTC TGAAATGTAT ATTGTCATGC TTTTGATCAT 
    TCATAATCGA TCTTATTAAG GTATGTTTAC ATATATATGA TCCTAGTGAG 
    CGATTAATAT TAGGGGTGAA CAGACTCTCA CACAAGAAAG GCTTATTTTA 
    CATTTATACA TTATCAAACT CAAAACACTG GAATATACGA TTAGACCTCA 
    AAAATACTTT CTCAACTGCA TGCATCATCT GTGTTTTAGT ACAATATTAT 
    TAGGCTAAAC ATGGATCACT AATATGAGCC AACTAACCGA TTGAATTTGG 
    CGATGCTATC TAATTGCAAT ATTCACTTAT TGGTAACGGC CTTTGTTACA 
    AGAAACAAAG ACAAAAAAAC AATGTTTTAT ACAAGAAGAT TAATTTCACA 
    ACATTATACT TATTCATTTG TCGTTCTTGA GAAGTATAAA CCATTAATAT 
    ATATTGCCTT TTTAATAATG GCTCTTTCAC CTTTTGCTTT ATAAAAGAGA 
    TAAAGGGACC AGTCTTTTAT TTGATTCATA CATATATAAT GTTATTATGT 
    CTTCAATGGA TTACACATGC ATATACCTA

AT4G37650.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Curator Summary
Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains.
Computational Description
SHORT ROOT (SHR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2470 Blast hits to 2429 proteins in 304 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 15; Plants - 2427; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37660.1

Model type
Protein coding
Short Description
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Computational Description
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8368 Blast hits to 8368 proteins in 2737 species: Archae - 0; Bacteria - 5618; Metazoa - 193; Fungi - 132; Plants - 255; Viruses - 0; Other Eukaryotes - 2170 (source: NCBI BLink).
Link
InterPro Scan - TAIR