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GT14472

CSHL Arabidopsis genetrap mutant lines

Original: GT14472

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14472

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10427359 [Map]; Strand: w
      • AT4G19030.1 - [+] show detail - NOD26-like major intrinsic protein 1
        Distance: -3872; Region: intergenic
      • AT4G19035.1 - [+] show detail - low-molecular-weight cysteine-rich 7
        Distance: 448; Region: intergenic
    Flanking Genome Sequence: GT14472 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    CATATACATG TGCAATCTAA TGCAAAGATC AATCACCAAG TGTCGTTAGC 
    TCAATTGGTA AAGACTCTAG GTGAAGCTTA AAGATCGCCG ATTCGAGTGA 
    TGCTTGGGAC GAAACTAATA TTACTTGTTG TGGTTTCGGG CCTGAGGGAT 
    TACGGGCTTT GACCCAGAAC CTCCTGGTAT TCAAAAAGAC AAAAAAATAA 
    GAGAAAAAAA AAATCAATCT AGTCTCTTTA CCTTCACGCG AGGCGGTATG 
    TATTGGAACA AATTGTCCCC CATGTCTGTT AACTGATTAC GTCGCTCAAA 
    CCCGGTTGGC TTAGCACAAC CTGCTTCGAC TTATCCGGGA TTGTAACGTA 
    ATTCTCTATC TATCTAAGTA CTCAAGAAGT TTAATTTGCG TTTGGATTGT 
    AGGAAAACAA ACAAAAAGTC TATCATCTT

AT4G19030.1

Model type
Protein coding
Short Description
NOD26-like major intrinsic protein 1
Curator Summary
an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance.
Computational Description
NOD26-like major intrinsic protein 1 (NLM1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 1;2 (TAIR:AT4G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G19035.1

Model type
Protein coding
Short Description
low-molecular-weight cysteine-rich 7
Curator Summary
Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.
Computational Description
low-molecular-weight cysteine-rich 7 (LCR7); CONTAINS InterPro DOMAIN/s: S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 15 (TAIR:AT4G19038.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR