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GT14664

CSHL Arabidopsis genetrap mutant lines

Original: GT14664

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14664

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 699857 [Map]; Strand: w
      • AT4G01630.1 - [+] show detail - expansin A17
        Distance: -796; Region: promoter
    Flanking Genome Sequence: GT14664 - 3-prime edge 
    TTTAACCAAC CAAAATAGTT TTCTTGTTAA AAATAGAAAA CTTGGATAAA 
    TGTCAAGTGT AGAAACAGAC GTCCCGCAGA ACATAAAGCT AAGTTTTGCA 
    TCATGTTAAA TAAAACTCAA CATGTAATTG TGTGATATAT TACATGCAAT 
    TGTTTTTAAG TACACTTATA ACGCGTCTCG TGAGAATTAG CTAGTATTAT 
    CATTACATAA ATTAGTTCTT TGGTATAAGA ATTATTACAT AGATGTATAA 
    CCAAATGGCA AGTTGTCTTA ATATTCGGCA ATGAATGTAG AATTCGAATA 
    TCAAATTATC AATGAGCTTT TGTTGAAAAT TCAACGTACG ATTTATCTTT 
    AAAATCAACG TACGAAATCA ACTGATAAGT GCTCCTCCAT TTACGGGAAT 
    TCCGTGGTAC GTTGCAAGTT GCCAACTTAC GCTGATAACT AGATTATCTA 
    TTCAGTATTT GGCATTTGAA GTTAACTGTT TTACAGTTTA TAGTTGACTA 
    AGTATAGGAC TGACTTTAAA ATTCTATCTA AACCGAACAA AATATCAAAA 
    TCTCTATGTA GTTCCTCCAT GAAGGTTAAT GAACTTCTTT AAGTTTATTT 
    AGATGGCTTG ATATACA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 700294 [Map]; Strand: w
      • AT4G01630.1 - [+] show detail - expansin A17
        Distance: -359; Region: promoter
    Flanking Genome Sequence: GT14664 - 5-prime edge 
    ACTTATACCT GTAATTAAAC CACCCATTGG CTAACTATAT ATAAAAAAAA 
    CTTGGTTGAC AAGGAGAAAT AATATAAAAC GCAGGGGTCG CGAGCAAAAG 
    AGTATAATAT TTTTAAAGAA ACTAACCACA ACTACCTATA CCCCACATGC 
    ACTTATAGGA TTTAACTTAA TTATCATATG CTTGAAAACT CCGGATTTTT 
    CGCACTTCTT ATAATCATTG AATCAATCAT CACCAAATCA TATTATTATT 
    TCCCACGTTT TCCGCTAATT ACAAGACATA TCTAGTTAAT TTATGCATAT 
    ATCTCAGGCC AAACAAGCTC TTTGAGTTCA ACAATAAACC GCTGCTAGCG 
    CCTAAGTCTT ATG

AT4G01630.1

Model type
Protein coding
Short Description
expansin A17
Curator Summary
member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Computational Description
expansin A17 (EXPA17); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A14 (TAIR:AT5G56320.1); Has 2142 Blast hits to 2139 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 24; Plants - 2075; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR