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GT14746

CSHL Arabidopsis genetrap mutant lines

Original: GT14746

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14746

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 396790 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14746 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCAAG GAGCATAAAC 
    AAGTTTTCCC AGAAATTGGA GAAATCAATA TCTCTGCGAT GAAGGTAATT 
    GGAATTTGCT ACTTTGTTTC ATACATTAGG AACAAGTAAT TGATGAGTTG 
    CTTTTTATTT TATTTTTCAG GTTAAAAGAC GAAGAGAGTT TTATCATTTC 
    TCAGAATCTT TGAATGTGTG TAAGGCTTTT GATGGCATTA GTACAGACTG 
    GTTTATGTAT ATTGATGCCG TTAGAGTTGA CAAGGGTAAG ACGTTGGCTA 
    TAATGGCTGT TGATCAAAAC CTTGAGTTGG TTGAGAAGAA GGAAGAGATT 
    CCAAATGGTA AGAATACTAA GGATTTGACT ATTGGAGAAG GTTTGGAAAC 
    TCAACTTGTT GAGAAAAAGA CGAGGAAGAG GAGAATTGTA AGTTCCGGTG 
    GGAAAACAAG TCGAAAGAAA TCTAAGGATC AATCTGTTGT TGCTGCTACA 
    ACTCAAAAAG TACAGGGTGA AGTTGCCTCT CAATCTTGTG CAGTTTCACC 
    AAGAGAAAAG CTAGAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 396699 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14746 - 5-prime edge 
    ACTTTGTCTA TAAACCAAAA ACCACAATAA TCAGAGAAAC GCAGTAACTA 
    TAAGTTTTAG TAAGCCGATT CAGTGATGAA TTTGAGAAGA GAGACCTTTG 
    AAATCGGAGA TGATTTCATC TTTATGCACA GGTAACGCGA GACGAGTGTC 
    GAGGTTGGTT TCTACAAAGA CGCAGCGAAT CTCCGGTGAG GAATCTGTTT 
    CGCGATTAGC CATTGTTCCT GGGAAACGAA AAGGTTTAGG GTTTTAACTC 
    TCTGTGTGTA AACTTGCTCT GTTTCTTCTG TTCATGAAAC GAAGAAGATG 
    AATCGTTTAT ATCTTGGCAA AACTCGGAGC CAGTGTTCAT TGGGCCGTAT 
    AATGGTAAGT GAAGCCCATT TAGCTACGTA ATTATTGCAA ATGAGTCATT 
    TAATTTAATC AAATTTATTA TTAGAGTCAA TACTTAATTC TCTTTACAAT 
    ATATGGAACT AAACTTTTGT TTCGATGCAT GATTCTCTTG GCTTGGAGAT 
    TACCATCGGA ATCTTCCTCA CTTCTCCATT TTCTTACGAA CTTGGGAACC 
    ATCTCGGGCC TTTCACAAAT CACACTTGAT CCATATCATT AACTCGTTCG 
    AACCGGACTG CACTCACTTC TCTGGCATTC CCTGCTAGTA TCTGTCT

AT4G00930.1

Model type
Protein coding
Short Description
COP1-interacting protein 4.1
Curator Summary
Encodes COP1-interacting protein CIP4.1.
Computational Description
COP1-interacting protein 4.1 (CIP4.1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 4 (TAIR:AT5G37190.1); Has 16041 Blast hits to 11566 proteins in 1061 species: Archae - 57; Bacteria - 4473; Metazoa - 4631; Fungi - 1351; Plants - 620; Viruses - 68; Other Eukaryotes - 4841 (source: NCBI BLink).
Link
InterPro Scan - TAIR