1. Home
  2. Mutant Lines
  3. GT14955

GT14955

CSHL Arabidopsis genetrap mutant lines

Original: GT14955

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14955

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26026327 [Map]; Strand: c
      • AT1G69220.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -156; Region: promoter
      • AT1G69220.2 - [+] show detail - Protein kinase superfamily protein
        Distance: -156; Region: promoter
      • AT1G69230.2 - [+] show detail - SPIRAL1-like2
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: GT14955 - 3-prime edge 
    ACGGTAGAGG ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCGTAATAAT 
    CTGTATAGGA TTCGATTGGT GAAAAAATCG GTAAAAAAAA ACTAACGATA 
    TCAGAGACTG TTATCGTTCG AAAGACATAC AACAATTGAA GCACATATGC 
    GTAGAAATTT AGAGATTATA CAGATTTTAT TTTTTGCTAG GGAACAAGAG 
    GTTTCACAAA ATGATAGAAG TGTGACGTGG GATAAAGAAG ATAGAGTGAC 
    CAAGTTGGCC TCAGTAGCTA GTTGCTACCA CCACCAAAGA GGTAATCAAG 
    AGACGAGCCA CCTCCTGGAG CTGAGTGAAC CTTGGTCGAT GGTCGGTCCT 
    GCGAACAACA ACCAAACAAG ATGTTTTAGT AACTGTACCA TAAGTTTTAG 
    ACGATTATTG CGTTGTTAGC ACAAAGCAAA ACCCATCAGT CTATTTGATC 
    TTCTTTCATT TTCAGACAAC TAATCTAAGA AAAGTAAAGA TACAGATGTT 
    TTTGCTATCC GATAACCAGC ACACAGGACT CGATTCAGCG AAAGAATTAA 
    AGACATACCG TGATGAAATT GCCTGTGTTT TGTCCTTCTG CACGCATGTA 
    ATTGTTTGCA GAGTTGCTAT TGAGACCAGC AGGAACTTGT TTGATGCTAT 
    CACAGCGTTT GGA

AT1G69220.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a putative serine/threonine kinase (SIK1).
Computational Description
SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 137554 Blast hits to 133946 proteins in 4802 species: Archae - 182; Bacteria - 16401; Metazoa - 51341; Fungi - 13391; Plants - 33553; Viruses - 570; Other Eukaryotes - 22116 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G69220.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a putative serine/threonine kinase (SIK1).
Computational Description
SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G69230.2

Model type
Protein coding
Short Description
SPIRAL1-like2
Curator Summary
SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion.
Computational Description
SPIRAL1-like2 (SP1L2); BEST Arabidopsis thaliana protein match is: SPIRAL1-like1 (TAIR:AT1G26355.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR