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GT14967

CSHL Arabidopsis genetrap mutant lines

Original: GT14967

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14967

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 95811 [Map]; Strand: w
      • AT1G01225.1 - [+] show detail - NC domain-containing protein-related
        Distance: -176; Region: promoter
    Flanking Genome Sequence: GT14967 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTACCA ACGTACTGAT 
    TTTCCGGGGC CTTTTGACCT TGATTCCAGG CAGGGGTAAT ACGGTCACTT
    CACAGCTTGG TGGTCGTTGA ACTATGAAGT AAACCAACCA GAAGCAAGAA
    GAGAACGACT TGGTCAAGCA AAGGATTTTG TTTACCACAC GACATCGTTT
    TTAATTGCAA ATCTGAAAGA TTCTTCTGCT TTTATTTTTT CCAAAGGTCC
    CAAAAAAATA TATCAATTTA CAAGAATCAA GATGATGACA CACTGACACT
    GTATGTATCT TTCAAATACA GATGCTCCAG TTGTAAACTT TGACATCAAA
    CTCTGCATGT TCTTCCAATC TCTGTCTTAA CTCCTTGGCT TTCTCTGCGT
    CCTTAGCCAA TATAAGTGAG AATCCACCAC CACCTGCACC TACCAGCTTG
    AATCCTGAGC TATAAGGTTG CGAAAACTCA AAAAGCTTAT CCACAAACTC
    ATTGCTGCAA TACGGATCCA GCTCTTGATG CAGTCTCCAA GCTTCTGACA
    TTATGTCGCC TACCTCGTCA ACTTCACAGT TCATCAACGC TTCTCTACCG
    GATTTCGCCA GCTCCGTCAA TCGCTTAATG CTTGAAATTA GGAGATTATC
    TCTTTGCAAA TACCTTGTAA CGACCTTGTG TAGGACTTGA TGAGCTAGCC
    TGACCTGTTT ATATAAAAAA GGCATAAAAT GAATGAGACT CTGTAG
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 95878 [Map]; Strand: w
      • AT1G01225.1 - [+] show detail - NC domain-containing protein-related
        Distance: -109; Region: promoter
    Flanking Genome Sequence: GT14967 - 5-prime edge
    CCTACTTTCT CCCTGGTTGG TAGCATTTGG ATTTGGAGAT AACGCCGTTA 
    AAAGACTCTG TAACGGGTTT GCTCAACAGC TCTCTCTAGT TCGTTTATCG
    AATTAGATAA TGCCACTCCA AAAAACGTTA CTTTACCTTA CCTATCTCGC
    TGACGTCAGA TCCCACCGTT AGAGCTTACA CTTGTAACGC CGTTTCCTGC
    ATTTTCCACA AGCAAGGTAA AAAAAAGCTT TGTGCAGAGA GAGAGAGAAG
    AAGAAAAATG GGTTTGCTTA CGAACAAGAT TGAGAGAGAA GAGCTAAAGC
    CAGGAGATCA CATCTATACT TACAGAGCAA TCTTCGCTTA TTCTCACCAC
    GGTAACTTTA GATTCATTCT TCCCAAGTTT GCTCCTTTCT TTCTCGTTCA
    TTCAATCATA ACATCAAAAA GTGAAATTAT CCTCAATGCA AGTCTTTTCT
    TTTAGTTTCT ACTGGTCGGT TTAATCTTCT TATTGAAACT GTAAATTCAC
    AAAGTTGACG ACTTTATCTA GATAGATCTT GAAGACAATG GTCTATATTC
    CAATCTTTGC ATGACCTAAT TTCACCCTGG CTCTGTATTT TGATGTTATT
    CCATCATATC TTCTGATCTC TGATGGACTT TATAGATGAT TTTTGTTTAT
    TTGACATATT TTTATCCCAA TTTCCTCTGG TGATGAAGAA TTGATACTGT
    TGTAGACATT CCTTCATGGG CTTTGATTTG ATTGTGGATT TTTGCGGAAT
    CTTT

AT1G01225.1

Model type
Protein coding
Short Description
NC domain-containing protein-related
Computational Description
NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR