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GT15149

CSHL Arabidopsis genetrap mutant lines

Original: GT15149

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15149

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9954140 [Map]; Strand: w
      • AT1G28360.1 - [+] show detail - ERF domain protein 12
        Distance: 1400; Region: intergenic
      • AT1G28370.1 - [+] show detail - ERF domain protein 11
        Distance: 1829; Region: intergenic
    Flanking Genome Sequence: GT15149 - 5-prime edge 
    CCGTTTTATC CCTAGTACAC TTGATTCTTC AACAAATTGG GTTCTGTTAT 
    GTTGGTTTGG CTTGATTTCG TTCTTGGGTT GAAATATACT TAACCAATAA 
    TCTAACTTCG TTGGTTTAAA CATTTCCGGT ATGGCTGGCT ATATGCGCAT 
    TATTATTTTT AATTGTTACT GAACCAATAA TCTAATTTAC TATGGCTAGA 
    AGCATATTTG TATTATTGTG AGTATATTGC GTGCCTATTT ACCCCGTGAA 
    TTTCCGTAAT AAGGCTAATC TCTACAAAAA TTAT

AT1G28360.1

Model type
Protein coding
Short Description
ERF domain protein 12
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Computational Description
ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G28370.1

Model type
Protein coding
Short Description
ERF domain protein 11
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Computational Description
ERF domain protein 11 (ERF11); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 6129 Blast hits to 5763 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR