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GT15315

CSHL Arabidopsis genetrap mutant lines

Original: GT15315

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15315

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21094481 [Map]; Strand: c
      • AT3G57000.1 - [+] show detail - nucleolar essential protein-related
        Distance: 184; Region: intergenic
      • AT3G57010.1 - [+] show detail - Calcium-dependent phosphotriesterase superfamily protein
        Distance: 1173; Region: intergenic
    Flanking Genome Sequence: GT15315 - 3-prime edge
    GAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAC 
    TCAATCCCGC GCAATCCCAA TCTGATATAT TTGTGCTTGG ACCAGAATAA
    TTGTATCTTG GTCCACGCCA CGGACAATGT AGGTAATCAC AGGTTTCGGT
    TTAAACGACG TCCGTTTGTG AAAAGATTTC CTTGGAAGTC CTCACTTATT
    TACTTTGTAC TTTAACAGCT TGTCAATCAA ATATTCTTGT AAAATAATTA
    TTAATCATTT TGATTTTGAT TTGAAGTCCA AATAATTGCC AAATTGAATT
    AAACGCAGAA AATAATTAAA CTGTTACACT TTAAATTAAA AACAATTCAG
    TTGATACGTT TTTTAGTTCT CTTTCTGTTT TTAAGAAATC TTTGGTTTTC
    TTAACTGTAC CCTAGTTTTG TTTG
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15315 - 5-prime edge
    CTTTCTCCCT GGGGGTCATG CCCCCCCGAA GG

AT3G57000.1

Model type
Protein coding
Short Description
nucleolar essential protein-related
Computational Description
nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57010.1

Model type
Protein coding
Short Description
Calcium-dependent phosphotriesterase superfamily protein
Computational Description
Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57020.1); Has 984 Blast hits to 970 proteins in 187 species: Archae - 1; Bacteria - 187; Metazoa - 221; Fungi - 0; Plants - 480; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Link
InterPro Scan - TAIR