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GT15620

CSHL Arabidopsis genetrap mutant lines

Original: GT15620

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15620

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21094480 [Map]; Strand: c
      • AT3G57000.1 - [+] show detail - nucleolar essential protein-related
        Distance: 183; Region: intergenic
      • AT3G57010.1 - [+] show detail - Calcium-dependent phosphotriesterase superfamily protein
        Distance: 1174; Region: intergenic
    Flanking Genome Sequence: GT15620 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CTCGCTCAAT CTCACGGCCA TGCCGTCCTA TTTGTACTTG GACCAGAAGA 
    ATTGGATCTT GGTCCAGGCC ACGGACAAGG TAGGTAATCA CAGTTTCGGC 
    TTAAACGACG CCGTTTGTGA AAAGATTTCG TTGGAAGTCC TCACTTATTT 
    ACTTTGTACT TTAACAGCTT GTCAATCAGA TATTCTTGTA AAATAATTAT 
    TAATCATTTT GATTTTGATT TGAAGTCCAA ATAATTGCCA AATTGAATTA 
    AACGAGAAAA TAATTAAACT GTTACACTTT AAATTAAAAA CAATTCAGTT 
    GATACGTTTT TTAGTTCTCT TTCTGTTTTT AAGAAATCTT TGGTTTTCTT 
    AACTGTACCC TAG

AT3G57000.1

Model type
Protein coding
Short Description
nucleolar essential protein-related
Computational Description
nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57010.1

Model type
Protein coding
Short Description
Calcium-dependent phosphotriesterase superfamily protein
Computational Description
Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57020.1); Has 984 Blast hits to 970 proteins in 187 species: Archae - 1; Bacteria - 187; Metazoa - 221; Fungi - 0; Plants - 480; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Link
InterPro Scan - TAIR