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GT15622

CSHL Arabidopsis genetrap mutant lines

Original: GT15622

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15622

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21094486 [Map]; Strand: c
      • AT3G57000.1 - [+] show detail - nucleolar essential protein-related
        Distance: 189; Region: intergenic
      • AT3G57010.1 - [+] show detail - Calcium-dependent phosphotriesterase superfamily protein
        Distance: 1168; Region: intergenic
    Flanking Genome Sequence: GT15622 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCGCT 
    CAATCTCACG GCCATGCCGT CCTATTTGTA CTTGGACCAG AAGAATTGGA 
    TCTTGGTCCA GGCCACGGAC AAGGTAGGTA ATCACAGTTT CGGCTTAGAC 
    GACGCCGTTT GTGAAAAGAT TTCGTTGGAA GTCCTCACTT ATTTACTTTG 
    TACTTTAACA GCTTGTCAAT CAGATATTCT TGTGAAATAA TTATTAATCA 
    TTTTGATTTT GATTTGAAGT CCAAATAATT GCCAAATTGA ATTAAACGAG 
    AAAATAATTA AACTGTTACA CTTTAAATTA AAAACAATTC AGTTGATACG 
    TTTTTTAGTT CTCTTTCTGT TTTTAAGAAA TCTTTGGTTT TCTTAAC

AT3G57000.1

Model type
Protein coding
Short Description
nucleolar essential protein-related
Computational Description
nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase, EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57010.1

Model type
Protein coding
Short Description
Calcium-dependent phosphotriesterase superfamily protein
Computational Description
Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57020.1); Has 984 Blast hits to 970 proteins in 187 species: Archae - 1; Bacteria - 187; Metazoa - 221; Fungi - 0; Plants - 480; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Link
InterPro Scan - TAIR