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GT15673

CSHL Arabidopsis genetrap mutant lines

Original: GT15673

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15673

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6750681 [Map]; Strand: w
      • AT4G11050.1 - [+] show detail - glycosyl hydrolase 9C3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15673 - 3-prime edge 
    GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCG GAGACAATGT 
    GAAATTCGGG CTTCCGATGG CTTTCACGGT GACAACAATG TGTTGGAGCA 
    TCATAGAATA CGGTGGCCAG CTGGAATCCA ACGGCGAACT TGGCCATGCC 
    ATTGACGCCG TTAAGTGGGG AACTGATTAT TTCATTAAAG CCCACCCTGA 
    ACCTAACGTT CTCTATGGAG AGGTAACAAT AATAACACTC TAATCACTAA 
    TCACTTTCTT TATTAATTAG ACTAACTATT TACATAATTT CAATTTGGTT 
    ATGGTAATTA TTTTGTAACT GTGAAGGTAG GGGATGGTAA GTCGGACCAT 
    TATTGTTGGC AAAGGCCGGA GGAAATGACT ACTGATCGTA GGGCTTACAA 
    AATTGACCGG AACAATCCCG GTTCGGATCT CGCCGGAGAA ACCGCTGCCG 
    CAATGGCTGC CGCATCCATC GTTTTCCATC GCTCTGATCC ATCATACTCT 
    GCTGAGCTAC TCCGTCACGC ACATCAGGTT TCTTAAACCC TAACCAAAAA 
    ACGGAATTAA ATAAGAAAAC CCTGAGTTTA AATT

AT4G11050.1

Model type
Protein coding
Short Description
glycosyl hydrolase 9C3
Computational Description
glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR