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GT15723

CSHL Arabidopsis genetrap mutant lines

Original: GT15723

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15723

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7770158 [Map]; Strand: w
      • AT3G22057.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
      • AT3G22060.1 - [+] show detail - Receptor-like protein kinase-related family protein
        Distance: -858; Region: promoter
    Flanking Genome Sequence: GT15723 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCCTGC 
    TGCGTAAAGC ATCAATGTCC TGTTGGGTGT AGTGGCTTCC AGCATGAGCT 
    CGTAGAGGAA ATCCCTCGTT TTCTTGTTGA ACAATTCCGT TTCCTCGATC 
    ATGTTTTTTG GGTTGTGCAT AGAGAAAACA TTCCTGTAAT CGTTCTTCCT 
    TGGGGATGAT CTGATGGAAT TAATGAAGAG AAAACATTGG TCGTACCATA 
    TTACTCTTCC TTTATTCCTC TGACATCTCC TACGAAGCTG CCATATACAT 
    AAATTTGTTG TTTCATCTTC ACTCGACAAG ANNNANCTAA TCAATGCAAA 
    GATATATCTT GATTTGCAAA AGATATACAT GTTTATATAT GTTAAAACAG 
    ATTTGATGAT TTATGTTTTA ATATTTTAAA TAATACCGAG TAAAATCCCA 
    ATAGAAAACA TTTTCCGTGT TTCTTTTGAT ATGCGACGGC TAATTAATAA 
    TGCTGAAGGG ACATTACCCC GGAAAGGGCG GTGGCATAGC AGGAGAGGCA 
    CTTGGCGTCG TA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7770220 [Map]; Strand: w
      • AT3G22057.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
      • AT3G22060.1 - [+] show detail - Receptor-like protein kinase-related family protein
        Distance: -796; Region: promoter
    Flanking Genome Sequence: GT15723 - 5-prime edge 
    TTTCTCCCTG CAGCAGGGGA GAAGAAGCTA GGGACAAAGA AATTGTATGC 
    AATGGTGCAG TGTGCGCAAG ACATATTGCG ATGTAAGGGT TGTTTGGAAT 
    GGAGTATCAA TGAGCTTTCC AAGTGCTGCC ACGGTAAACA AGGAGCAAGA 
    GTTTTGGGGA CAGAGTGTAC TCTTAGGTAT GAGCTATACC CTTTTCTTAG 
    GAGTTAAAAG TTTGTTTGGT CGATGATGAT GTAAAAGACA ATCTCCTGAC 
    AACTTTCCTA TTTTGTTTGG TTTTGTTTTC TTAATTTTGT TTTATTTTTG 
    GTTACAAATC AAAACTTTTT TGGTTTGAAA TAAGATAATG TATAAATCTC 
    TTTTAAATTA GTGAAAACCC TCGAACAAGA AAAAGAACAA AAAAAAATTT 
    GATTTAATAT ATTGGACCAG TTAAAGGGAG AAAATTATCT TTTACAAAAA 
    ATACATTTTA AAAAA

AT3G22057.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF26) (TAIR:AT3G22050.1); Has 182 Blast hits to 182 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 182; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G22060.1

Model type
Protein coding
Short Description
Receptor-like protein kinase-related family protein
Curator Summary
contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain
Computational Description
Receptor-like protein kinase-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF26) (TAIR:AT3G58310.1); Has 1682 Blast hits to 1490 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR