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GT15793

CSHL Arabidopsis genetrap mutant lines

Original: GT15793

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15793

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2103338 [Map]; Strand: w
      • AT1G06840.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15793 - 3-prime edge 
    AATGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACCCAATACC AACTACTTTC CTCTTTCTTT GTCTTGTGTT TCTTACTTGG 
    TCATGGCCTT TTCCTTCTAA ACTCTCTCTC TCTCGAGATT TCGTTTTTTC 
    CTTGGGTCTC CTCTGTTTCC TCCTCTCTCG ATATGTTTTC GACCCATCAT 
    GTCTCTCGTC TCCTCATACC TCTGCTCTTC TTCTTCCTCT TCTGTTGCTT 
    TTCTTCTACT TTTGCTCAAG ACGACATCAC CAATCCCGTT GAAGGTTTCT 
    TTTTTGTTGT TGTTGTTGTT AAAAGGCTTT GTCTTTGGTG TTAGATCTTC 
    AGACAATTTG TGTCTGTGAC AATGGGTTTT CTTAGCCTTT CGACTGATTT 
    GGTACTGATC ATTGATGTTT TTTTTGGTTT TAGTGAGGGC TTTGCGAGTG 
    ATCAAAGAAA GTTTGAACGA TCCTGTTCAT AGATTGAGAA ATTGGAAGCA 
    TGGAGACCCG TGCAATTCGA ATTGGACTGG TGTTGTCTGC TTCAACTCCA 
    CTCTTGATGA T

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2103391 [Map]; Strand: w
      • AT1G06840.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15793 - 5-prime edge 
    ACTTTCTCCC TGGTATTGGG TGGGAGCATT GAAGAGTGAT AATACGACAT 
    TTTCTAAGTT TGACTATTTC AGGTAATGGA TGAGACCGAC GGAAGAGCGT 
    CATCATAAGT TTCCGTTGCG CCGCCGCCAT AACTTCACCA CCTTCTTCCG 
    TCAAAACCAT TCTACTTGCT ATTTTTCTTC CTTTGTTTAA TGATTCCTTG 
    TCTGACCTGT CTTTGACCTT TTTGTCGTTT TTTTAATCCT TTTTTAATGA 
    CAGTAGGTAA ATCTCTTGCC AGGTGCGATG AATTTCCAAA TATTGTCAAT 
    AAAGTTACCT TTTTATCCCA CCTTGATTTT TTTTTTAGGT ATAAATAAAA 
    ATTTAAAAAC GTATCCCATT AGCAAATAGT ACCAATCTTT GGTATATGGA 
    AATCATATAG AATATGGCAA TTTGGCCATC AAAATCGAAT CTTTATGGGC 
    ATTTGGGCCC CCACAATACT AAAAGTCACA AAATTTTCCA AAGAAGTATC 
    AACTTTTATT GGAAAAGGGG GCTAATTATC AACTGATTTG AAAAAGGGGG 
    ATAAATACCC GGAAGCCATT ATAATTTTCT TGACCAAAAA AAGAAAAACC 
    GGAAAATGTT TGTCCCTATG CCGAATCATT CCAAGAGGGA AAAAAAAAAA 
    ACACTTGGAA TAAATTCCTC AAATAAAAAA AAAAATCCAT GGGGCCCTTT 
    TAAA

AT1G06840.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink).
Link
InterPro Scan - TAIR