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GT16012

CSHL Arabidopsis genetrap mutant lines

Original: GT16012

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16012

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6883066 [Map]; Strand: c
      • AT3G19820.2 - [+] show detail - cell elongation protein / DWARF1 / DIMINUTO (DIM)
        Distance: -751; Region: promoter
      • AT3G19820.3 - [+] show detail - cell elongation protein / DWARF1 / DIMINUTO (DIM)
        Distance: -945; Region: promoter
    Flanking Genome Sequence: GT16012 - 3-prime edge 
    AATGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACTCGTGAGG TTACTAAGCC GACGATCTTA TATATTGTTT ATTGGCAACA 
    AGTTCATTAC AACTTTTCTT ATCATAATAG TTATTACAAC AATCTTTAAC 
    ATTTAGTTTT GATATGTTAT GATTGAAGCA AAAAAAGCAC TGCCTAAAAT 
    ATCTTGAAAA CATTATACAT TATGAATGCT AATGAGAGTT CCTTATATCT 
    TTCTCTCAAC TCTTAAGGGA TCTTCAAATG AGTGTTTTTT TTTAAGCCAA 
    AACAATTGTG AATTAGTCAT TCAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6883018 [Map]; Strand: c
      • AT3G19820.2 - [+] show detail - cell elongation protein / DWARF1 / DIMINUTO (DIM)
        Distance: -703; Region: promoter
      • AT3G19820.3 - [+] show detail - cell elongation protein / DWARF1 / DIMINUTO (DIM)
        Distance: -897; Region: promoter
    Flanking Genome Sequence: GT16012 - 5-prime edge 
    TCCTACTTTC TCTCTGTCGC ACGAGGATGG AATGTGCTTT AGGTACATCA 
    ACAAACATGT AGGAGGACTG TTTCGCTAAA AGCATTTAGA AAACAAAAAT 
    CAATACAATC AACCCATAAA ATGCATTTAA AAAAAAAACG AATTGGACAA 
    TTACATTTCC TTCATTGGGC ACATGTCTTC CTGTAATTTA TTGGGATTTA 
    CATACCAAAA GAAAGATATA TTTTTCTATT TAAAAAAAAT TTAAACTGCT 
    AAAATTTGTT GCCTTTTTTT ATTTATTTGC TTTTACCTAT TTATAGCAGA 
    AAACTCTTTT CAAAAAAAAT ATCCCTACAA AAAATTTGCC CCCAAATTCC 
    TTTTATATGC TAACTGCTAA GTAAAAAATT ATATTTTGGA AAATATGTCT 
    AATTAAGCTC TAGGTTCGAT TTACATATAA TTTCTAAATT TTAAAAAAGT 
    TGGTAAAAAT ATTTTAAATC CTGATATAAG TAAAAAAAAA TTTTTTTTAT 
    TTTCTTCCCT CCAAATTTTA ACCTAAAAAA TTGCTCATAA AA

AT3G19820.2

Model type
Protein coding
Short Description
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Curator Summary
Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.
Computational Description
DWARF 1 (DWF1); FUNCTIONS IN: calmodulin binding, catalytic activity; INVOLVED IN: response to light stimulus, steroid biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: integral to membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094); Has 2747 Blast hits to 2744 proteins in 657 species: Archae - 35; Bacteria - 1665; Metazoa - 178; Fungi - 472; Plants - 176; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G19820.3

Model type
Protein coding
Short Description
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Curator Summary
Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.
Computational Description
DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094).
Link
InterPro Scan - TAIR