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Mutant Lines
GT16180

GT16180

CSHL Arabidopsis genetrap mutant lines

Original: GT16180

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16180

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 8678709 [Map]; Strand: c
- AT2G20100.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT2G20100.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: intron1 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATAAACA ACATGATCTA 
ATATGGATTG TCTTTGAATG AAGGGGTGGA TTGATGATGG GAGAGGAAGA 
GAAAATGGAG ATGATGAACC ATCATCATCA TCAAAATCAA CACCAAAGTT 
ACCAAGCGAA GAGGATACAA AATTGGGAAG AACAAGTTTT GAGGCACCAA 
GCTTCCATGA AACAAGAGAG TAGCAATAAT AATAGTTATG GAATAATGTC 
CTCACCAAAC TCACCTCCAA ACAAATCTTG TGCTACAATT ATCAACACCA 
ATGAAGACAA CAACAATAAC ATTCACAGTG GTCTTAACTT GTCCGAGGTG 
GGTCAAAATA GTGAATTATT CAGATCAAGA TATAATCTTT ACCAAATATT 
AATTAACATC TCCATATTTT TTCTTTATCA ATGAATATAT CTGAATTTTG 
TTTCTGTCTA TGTGTGTTCA TGAAGTGTAA TAGCTCAGAG ATGATTGGGT 
CTTCTTTTGC TAATAAGAAA CCAAAACTTC AAGTT

AT2G20100.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G20100.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29100.1); Has 824 Blast hits to 818 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 6; Plants - 666; Viruses - 2; Other Eukaryotes - 130 (source: NCBI BLink).
Link: InterPro Scan - TAIR