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GT16270

CSHL Arabidopsis genetrap mutant lines

Original: GT16270

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16270

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25502499 [Map]; Strand: w
      • AT5G63710.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: GT16270 - 5-prime edge 
    TTTCTCCCTG CTTCAGGGAC TGGTGGTTTG GCTGAGAAAT GGACTGAATG 
    GGAACAACTT GAAGAAGTTA GGAACAAAGA AGCATTGTTG CTTCCGACTT 
    TACCGGCTAC TTGGGATGAA GAAGAAACCA CCGTTGATCA AGAATCTATC 
    CGATTATCGA CAGCAAGATG AAGAAGAAAC AGAGAGAGAA AGATATCTAT 
    GAAAACAAAC TTGCATTACA GAAGATAAAC TTAGAAAGTA TTTTAAGCTG 
    CTAATTGTAT TGAACCAGGT GGGGAAAACG AAGCAAACAC ACAACGTTGA 
    TTTGTGTAAT AGATGATATG ATATACATAA CTAGTTGTGT TTTGTATATA 
    TATGAATTTG GTTATTTTCG TATGATAATG ATGATCATGG TTGTTATGGT 
    GGCAGTGTTT GCTCTGTTTT TCTACATACG TCGTCGTTTC GTGTGTGTCC 
    CGTAAAAATT ATAAACTTCT GAATCCAGTC CTTGAAGTTT AGTTGGTTTT 
    TCAATTTTAC CTTCAACTTT TGTATTGTAA CAATTTACCC CACTTGTGAC 
    ATTGTTTATG GCTAATTTTA CGTCGAGTAT TCTTGTTTTT TTCTGCACGT 
    CGAGTATTCT T

AT5G63710.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G10290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR