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Mutant Lines
GT16372

GT16372

CSHL Arabidopsis genetrap mutant lines

Original: GT16372

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16372

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 12335742 [Map]; Strand: w
- AT2G28755.1 - [+] show detail - UDP-D-glucuronate carboxy-lyase-related
  Distance: -1283; Region: intergenic
- AT2G28760.1 - [+] show detail - UDP-XYL synthase 6
  Distance: 446; Region: intergenic

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
TTTCGGAATA CTCTTTTGTG TTATTTCTTT CTAGTCAGGT AAAAGACAGA 
TCCAATACGT ACAACTAAAC AATTCAATAT CTGACCAAAT AAACCTACAA 
AATACCATTA TTTTTAATAT ATTAAAATTT ATGCTTGTCT AAGTTGACAT 
GGTTCCAAAA AAGCCATTGG AGAAGGGCAG AGTTTTGAGA TTCATGAAGG 
AATTTCTTGG CTGCAAGTTT TTTTCAAGAT TTGTGCGTCT AGGTACGGTA 
TGAAGCTAAT ACCAAGATTG TGCTTATAAT TTTGCATGAG AAAGAAATCC 
TAAAACAGAA ATTCTGAGTT CATTCTTCAA GATTTGTGCT TCTTTGTTTT 
GATTCCAATG TGGATAAGTA TTCAACTTAA TGAGAATTTT TATGACTAAT 
ACCTATGATA TTTGTATGAA AATTGAATCA AGAGCACATG TTTTATGAGT 
TTTTCGAGAT CAATGTGATC CAAGTTATAC CTCAGCAAGA ACAACACCTC 
CCAATTCACT ATCAGTGGAG TCTTTGAGTT AAA

5 prime edge [+] show sequence

Chromosome: 2; Position: 12335831 [Map]; Strand: w
- AT2G28755.1 - [+] show detail - UDP-D-glucuronate carboxy-lyase-related
  Distance: -1372; Region: intergenic
- AT2G28760.1 - [+] show detail - UDP-XYL synthase 6
  Distance: 357; Region: intergenic

CGGATTAGTT GAATGTATCT TCGATCAACT AGTATATAGT CTATAAACAA 
AATTAGTAGT TTCTACCTAT CACGTTTTAA GACCAATCGC ATATTAGGAG 
AAAGAGAGGC TTCAACCTTG AGCTTAAGAA GAAGAGAGAC TCTAGTTTGT 
TGGACTGTTC TCTTAACAAT GTCTCTTCTT GGTTCATTCT TTAAACCAGT 
GGTGTGAGAG ATAATGAGGT AGAGTACAAA CTGACATAAA CTAGATTGTT 
AAATCAGAAA CTCTATAAAC CAAAAAACTC GAAAATCCGG ATTGACACAC 
TATTAGTTTT TATTCGTTTG ATGTTTCAAA TGAATTCGAT CATTTGGGTA 
CAATACAAGG AAAACAATTT GGACTTTTCC ACATTTCACA AGATCAGTGA 
AAATGAAACG ACTCATTTTG TCGACTACTA AGCTTAAAAC ATCTCACTGA 
TTACATTCAT AATAAAATTC AAGTAGTAAC GTAACATCAC TTCCCTAAAA 
TGTTCCTCGT TAGGACGCTT ATTTCCTACA AACTCAAAAT GCAAAGAGAA 
AGATTAAAAG ACATGCTCCA CATGTTCCGG GGATAAGTGT GCACTTGCTT 
CGACTTGGAA CCCCGATTTC AACAAACAAA CAAAATGATA AGACCACACA 
ATTCCATGAA ATTAAAATAG CAATTATTTT TCTTCTTCTT TTTT

AT2G28755.1

Model type: Protein coding
Short Description: UDP-D-glucuronate carboxy-lyase-related
Computational Description: UDP-D-glucuronate carboxy-lyase-related; BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 6 (TAIR:AT2G28760.3); Has 831 Blast hits to 831 proteins in 250 species: Archae - 2; Bacteria - 368; Metazoa - 79; Fungi - 6; Plants - 222; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G28760.1

Model type: Protein coding
Short Description: UDP-XYL synthase 6
Computational Description: UDP-XYL synthase 6 (UXS6); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2); Has 45408 Blast hits to 45356 proteins in 3037 species: Archae - 861; Bacteria - 26677; Metazoa - 782; Fungi - 385; Plants - 1435; Viruses - 88; Other Eukaryotes - 15180 (source: NCBI BLink).
Link: InterPro Scan - TAIR