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GT16438

CSHL Arabidopsis genetrap mutant lines

Original: GT16438

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16438

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18585873 [Map]; Strand: c
      • AT5G45810.1 - [+] show detail - CBL-interacting protein kinase 19
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16438 - 3-prime edge
    GTAGAGGTTT TTACCGACCG TTACCGACCG TTTTCATCCC TAATCGAATC 
    GATTGAATCG GTTTCGGGGA GGTCTTCTAC TGTTTCTGAA CCGGAAGACT
    TCGAGTCTTT TGATGGGAGG AGAAGAGGTG GTTCGATGCC TAGACCGGCG
    AGTTTGAATG CTTTCGATCT CATTTCGTTT TCGCCAGGTT TTGATCTTTC
    GGGTTTGTTT GAAGATGATG GTGAAGGATC TAGGTTTGTA TCTGGTGCTC
    CTGTTGGTCA GATCATTTCT AAGTTGGAGG AAATCGCGAG AATTGTGAGC
    TTTACGGTGC GAAAGAAGGA TTGTAAAGTG AGTCTTGAAG GTTCAAGAGA
    AGGAAGTATG AAAGGTCCAT TGTCAATTGC TGCTGAGATA TTTGAACTGA
    CACCAGCTTT GGTTGTTGTT GAAGTGAAGA AGAAAGGAGG TGATAAAATG
    GAGTATGATG AGTTTTGTAA TAAGGAGTTG AAACCTAAGT TGCAGAATTT
    GTCTTCCGAA AATGGCCAAC GGGTTTCTGG TTCGCGTTCT TTGCCATCGT
    TTTTACTTTC TGATACTGAT TAGGAAGATG AAAAATGAAG TTTTTGTTTC
    TGTTTTATTA GTTTTGTGAC TCATATGTGG GGTTAACGAC TTGTAATGTT
    CTGGGTCCTT TGATGGTGTG TGAGAGACAT TAGAATTTAG ACCTAAAGAG
    GGTGGTGAGA TATGAATCAT TGATGTGTAG AAAACACAGA T
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18585793 [Map]; Strand: c
      • AT5G45810.1 - [+] show detail - CBL-interacting protein kinase 19
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16438 - 5-prime edge
    ATCTCATCAT CATCAGCAAC GTTACAAAGC TGATGATCAT CTTCAACATA 
    AAACTTAATA TGCTTAAAAC CTTTCTTGAA CCAACTAGTC TCCATAATAT
    CCGGCATTGT AAACCGTCTC TCCGGTTTAG TCTCCAACAT TCGAATCAAT
    AACCGGTTAA TCTCAACCGG AAACCATCTC GGACACCTAA AATCTCCTCT
    GTAAATCTTC TTATACATAG CCATAACATT CCGATCATGA AAAGGAAGAA
    ACCCTGCCAT TAACACAAAC AAGATCACTC CACAAGACCA AATATCGACT
    TTAGCTCCAT CGTAGCCTTT CCGAGCAAGA ACCTCCGGTG CCACGTAAGC
    AGGGGTCCCA CAAAAAGTAT GAAATAACCC ATCTTGTCGA ATCTGATCAG
    AAACAGCACT AAGACCAAAA TCAGAGACTT TTAGGTTTCC ATTTTCGTCT
    AAAAGAAGAT TCTCC

AT5G45810.1

Model type
Protein coding
Short Description
CBL-interacting protein kinase 19
Curator Summary
Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.5), which has also been reported as a member of the CBL-interacting protein kinases (CIPK19).
Computational Description
CBL-interacting protein kinase 19 (CIPK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: petal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 12 (TAIR:AT4G18700.1); Has 131743 Blast hits to 129755 proteins in 4578 species: Archae - 210; Bacteria - 15711; Metazoa - 47953; Fungi - 13173; Plants - 32300; Viruses - 528; Other Eukaryotes - 21868 (source: NCBI BLink).
Link
InterPro Scan - TAIR