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GT16972

CSHL Arabidopsis genetrap mutant lines

Original: GT16972

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16972

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 735928 [Map]; Strand: c
      • AT2G02650.1 - [+] show detail - Ribonuclease H-like superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16972 - 5-prime edge 
    TACTTTCTCC CTGCATTGAG CCATTCTGTG TCGCATCTTG AATTCCTTTC 
    CTTGCTTCAT AGTCCGGCGA TTGACACTTC TGTTGAAATA AGAACACGTT 
    TCTCGATTTC CAAAGTCGCC ACATAATCCA AAAGGGAAGA AACCGGTCAA 
    GAGAGTTTGT TGTTTGTGTT TTGCTCAGCT GGATCAAACG ATTTAGATTG 
    TCTTCAAAGG AGCTTGGTGG TCCCCATTGG TGTGCCAAAA AAAATGTTTG 
    CACTGCGCCA CACCGACTGG TTATATGAAC AGTTAAACAT TATGTGATGG 
    ATCGTTTCTT CTTCAATACA GCACCGTTGT CATATTGGCT CCGCATCAAT 
    GTTTCTTGAA CGCAGTCGTG TATTTGTTGC TAGTGCTCCT GTTACACATC 
    TCCACAAGAA GTGTTTAATT TTCGGGGCAA CATGGAGTTT CCAAATCGCT 
    TGTT

AT2G02650.1

Model type
Protein coding
Short Description
Ribonuclease H-like superfamily protein
Computational Description
Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT3G09510.1); Has 1375 Blast hits to 1363 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 1371; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR