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GT17428

CSHL Arabidopsis genetrap mutant lines

Original: GT17428

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17428

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3875866 [Map]; Strand: c
      • AT3G12145.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17428 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCCGGA GGTAACGCTG 
    AGACCGGTAA CGCGACGGTT AGTGCATTCG ACGCCGGTCC AGCCGGTACA 
    ACAGTCGGTT CGGGGGTTCC AGGAGGATAG AAGGGGAGGA TTGCCAAGTG 
    CTTTCTTGAT TTGAAGGAGG GCATTCTTGT CATTTTCGGT GCAGCTGTAA 
    GAAGATGGGA GAGTGATGAA GAGGATGGAG AAGAAGATAG AGAGATGAAC 
    AAAGAGCTTC ATCGTGATTA TGTGTGGATG CTTTGAGGAA TGAGCAAGTT 
    CTTGTATATA AGCAGAGACT TCAATGGAAC ACAGCTGTGT AATGTTACTG 
    ATTTTGTACA GTTAGGGTTC TACACTACTC CCAACGTACA ATATTCTTTT 
    NCACAACATA AATTTAATTC ACAAGCATGG TACATATATC TCTACTATTC 
    AATAATTTGA CCGTATGATA GTCACTGGCA CACTGCACCA AATAGTTAGG 
    TATACAAATG TTTTAGCATG TGTTTTTCAT TGTGTATAAG ATATATACGC 
    TAGTTACCGC ATCATTCATA GTGAGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3875776 [Map]; Strand: c
      • AT3G12145.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17428 - 5-prime edge 
    GAAGTCTCCG GTCAGATCTC GTACCAGATC GGCGACCTCG TTGACCTCCG 
    TACACTAGAT TTCAGCTACC TGCCACACCT CACCGGAAAC ATCCCACGCA 
    CCATCACCAA ACTCAAGAAC CTCAACACTC TCTACTTGAA GCACACTAGT 
    CTCTCCGGTC CGATTCCTGA TTACATCAGC GAGCTCAAGA GCCTCACGTT 
    CTTGGACCTT TCTTTTAACC AATTTACCGG TCCAATTCCC GGTTCGCTAT 
    CTCAGATGCC GAAGCTTGAA GCCATTCAAA TCAACGATAA TAAGCTAACC 
    GGTTCTATAC CAAACTCTTT CGGTTCTTTT GTTGGCAACG TCCCTAATCT 
    CTACTTGTCT AACAATAAGC TGTCAGGTAA TTAGCCATCA TTTTCCATTT 
    CTTTAATAGT TAATACTATG CTTTTGGTCA AATGTTTATT TATTAGTTTT 
    TGGCTTGGCT TGTGTTCAAA GTCAAATGTT TATTTATGTC GGAATCGTAG 
    AACTAGCCTC GTGCC

AT3G12145.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.
Computational Description
FLOR1 (FLR1); FUNCTIONS IN: enzyme inhibitor activity, transcription factor binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 1 (TAIR:AT5G06860.1); Has 42601 Blast hits to 16185 proteins in 663 species: Archae - 31; Bacteria - 1045; Metazoa - 3045; Fungi - 233; Plants - 35461; Viruses - 0; Other Eukaryotes - 2786 (source: NCBI BLink).
Link
InterPro Scan - TAIR