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Mutant Lines
GT17552

GT17552

CSHL Arabidopsis genetrap mutant lines

Original: GT17552

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17552

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 16566695 [Map]; Strand: w
- AT2G39710.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: -3315; Region: intergenic
- AT2G39720.1 - [+] show detail - RING-H2 finger C2A
  Distance: 514; Region: intergenic

TTTCTCCCTG CATTCCATAG GTACAATAAA CGGGCATAAA CAAATCTATT 
AATGGAAAAT AATGGCTAAA TTACAAAGAC TGTCTCCAAT AAACGACAGC 
ATCATCAGAT GCGTTGTATA AAAACTCTAT TATTGCTTTA CTTCACGTTT 
CCTGTGGTTA TTGACCTCAA ACTTAATTGG TCTCTTTATA AGATTCTTCT 
ATATATAGCC TCTAGGTAAG TATCATTGGG TTGTGTCTGC AGTTCCAAGA 
TTATAGCTGT ACAAGTTTGG CAGCATAATT CTCTTTAGGC GTGGAAAATA 
AACCATCAAC TTAAAAATTA ATGAAAAACT TAGGTTTGAA CACTAAAGAT 
TTAGTCATCT AAGTATGTAC TCACAGGTTA ATATATATTA AAACCCATAG 
TATTGGTTAG TAACACCACA TATGTATACT CTGAAATGAA TTGCAGGAAA 
TCTACTCCAC AAAATAACTT TTCAAGTTTG TTGAAAACTC ATGTAATGAT 
AATATCGTTT GGAAATCATT CGCTATTTTA TGGTTAAGCT GCTTAACATT 
AGTATCACAA TCCATAGACT CACGTAACGA TTTCTACAAA TAGAACAACT 
ATGAATCTCC TTCAGAGTAC ATTCTTC

AT2G39710.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Curator Summary: Encodes a Cysteine-rich peptide (CRP) family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G39720.1

Model type: Protein coding
Short Description: RING-H2 finger C2A
Curator Summary: Encodes a putative RING-H2 finger protein RHC2a.
Computational Description: RING-H2 finger C2A (RHC2A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8622 Blast hits to 8603 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 2413; Fungi - 807; Plants - 4301; Viruses - 28; Other Eukaryotes - 1073 (source: NCBI BLink).
Link: InterPro Scan - TAIR