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GT17863

CSHL Arabidopsis genetrap mutant lines

Original: GT17863

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17863

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16865837 [Map]; Strand: w
      • AT2G40380.1 - [+] show detail - prenylated RAB acceptor 1.B2
        Distance: -395; Region: promoter
    Flanking Genome Sequence: GT17863 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACTGTACG TGCTATTCAA 
    GTTCTTCCAT ATGTGGAAAT CAACCCAAAT TTCCAAGAAA TATTCTTTGA 
    TTAGGCCAAA GAATATTGTT ATTCGATGCC TCTATTCTAC TCAATAATGT 
    TGTCTTCGTC TTTATCTAGT TAATTGTTAT ATGTTTCGAT ACTTAAATAA 
    ATATGAAATT TTTTTATGTT CTTTCACAGT TGTTAATACA TGATATCTTT 
    AGCAACCATC CATCGTCACT CGTGATTGTT TCACACTTTC ACTTGTTCAA 
    CGAGTAGGTG TGAAATGAGA TGATGATATA ATTACAAATT TTGCCACTAA 
    CTCCAACTTA ATATGATTGG GCCTCTTCCA ACATTATAGG CCCATTAAAC 
    TTAGGCCTTT AGAATATCTA ACACGGTTTT GCCGCAACTT CAGTTTCCAC 
    AAAATTCGGA ACCAAAAAAA ATCACACTCT CTCCGCCGCA CACACACCAC 
    CGACACCACC AATAAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16866997 [Map]; Strand: w
      • AT2G40390.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -296; Region: promoter
    Flanking Genome Sequence: GT17863 - 5-prime edge 
    CTTTCTCCCT GTACTTTATC ATTTCACAAA TAATTATATC CATCCTAACG 
    GACTCTAGCT ACTCTAATTA TGATCTAAAC CTTTTTCCTT GTATGTTATC 
    TCATAATTTC CAGGACTCTT AATCATTATT ACATTCCAAA TTTTCAATAT 
    TTTACTAAAG AGACGTCTCG TGTTCGTGCG TAGCTCTATA TTTTCTGGTT 
    TACGTAAAAT AGTTCATGAT TTTGTATTGA ACGATTTGTA CACTCGTTCA 
    ACGAAACCAA GCATTCTTCA ATCTTTCAAA TCCATTAGTT TACTTTAGCT 
    TACCTTTTGA AAAAAATAAG CGAATCTTTC TTCCTTTACT TTTCTTCCAC 
    TCATTAAAAT GTTCTCTCTA TATATAAATG ATAAATCTAG TCTTCTAATC 
    ATATACTCTC TATACCACAC ATATCTAGAA CAACAACTAG ATATTCAATA 
    TTAGCTCTAA TGGCTTCTGT GGGAACCCCA CCAGATGCGT TTGCTTGGCT 
    TCAAACTCTT CCTCCTCTTT CTCAATGGAA AGGAAATTTA ATGTCCATGT 
    GTATTTGCTC TCCAAA

AT2G40380.1

Model type
Protein coding
Short Description
prenylated RAB acceptor 1.B2
Computational Description
prenylated RAB acceptor 1.B2 (PRA1.B2); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B1 (TAIR:AT3G56110.2); Has 573 Blast hits to 573 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 100; Plants - 320; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G40390.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 75 Blast hits to 75 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR