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Mutant Lines
GT17952

GT17952

CSHL Arabidopsis genetrap mutant lines

Original: GT17952

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17952

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 3876308 [Map]; Strand: w
- AT3G12145.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
  Distance: -71; Region: promoter

TATTTTACCG ACCGTTACCG ACCGTTTTCA TCGTAAAACA TTTGTATACC 
TAACTATTTG GTGCAGTGTG CCAGTGACTA TCATACGGTC AAATTATTGA 
ATAGTAGAGA TATATGTACC ATGCTTGTGA ATTAAATTTA TGTTGTGAAA 
AGAATATTGT ACGTTGGGAG TAGTGTAGAA CCCTAACTGT ACAAAATCAG 
TAACATTACA CAGCTGTGTT CCATTGAAGT CTCTGCTTAT ATACAAGAAC 
TTGCTCATTC CTCAAAGCAT CCACACATAA TCACGATGAA GCTCTTTGTT 
CATCTCTCTA TCTTCTTCTC CATCCTCTTC ATCTCACTCG A

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 19564427 [Map]; Strand: c
  - AT3G52780.1 - [+] show detail - Purple acid phosphatases superfamily protein
    Distance: -232; Region: promoter
  - AT3G52780.2 - [+] show detail - Purple acid phosphatases superfamily protein
    Distance: -232; Region: promoter
Flanking Genome Sequence: GT17952 - 5-prime edge
```
CTTTCTCCCT GCCCCCCCGA ATATACTAAG ATACATAATG ATTTCCATGC 
AGGTTTTGAA CATGCTACAT TCGTGTACTT TGCAATTGCT TGCACAGTTT 
TTTATTTTTA TTTTTTATTA ATGAATTAGT GGAAAAAGTA CCAATTAGTT 
AAGTTTTGGT CAAATACATT TTCCAATTTT ACAAGTTTCC AAAATGAAAA 
CAAAAAGAAG GGGAAAGGAT TACTACTATA TAACACTGTG TCCCTAATTC 
A
```

AT3G12145.1

Model type: Protein coding
Short Description: Leucine-rich repeat (LRR) family protein
Curator Summary: A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.
Computational Description: FLOR1 (FLR1); FUNCTIONS IN: enzyme inhibitor activity, transcription factor binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 1 (TAIR:AT5G06860.1); Has 42601 Blast hits to 16185 proteins in 663 species: Archae - 31; Bacteria - 1045; Metazoa - 3045; Fungi - 233; Plants - 35461; Viruses - 0; Other Eukaryotes - 2786 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G52780.1

Model type: Protein coding
Short Description: Purple acid phosphatases superfamily protein
Computational Description: PAP20; FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2203 Blast hits to 2179 proteins in 456 species: Archae - 3; Bacteria - 801; Metazoa - 198; Fungi - 77; Plants - 777; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G52780.2

Model type: Protein coding
Short Description: Purple acid phosphatases superfamily protein
Computational Description: PAP20; FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2133 Blast hits to 2115 proteins in 453 species: Archae - 1; Bacteria - 782; Metazoa - 195; Fungi - 75; Plants - 759; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link: InterPro Scan - TAIR