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GT18064

CSHL Arabidopsis genetrap mutant lines

Original: GT18064

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18064

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22354680 [Map]; Strand: w
      • AT5G55080.1 - [+] show detail - ras-related nuclear protein 4
        Distance: -1622; Region: intergenic
      • AT5G55090.1 - [+] show detail - mitogen-activated protein kinase kinase kinase 15
        Distance: 2172; Region: intergenic
    Flanking Genome Sequence: GT18064 - 5-prime edge 
    TCTCTGATGA ATTTGAGAAA GTTAAGTGTT GAATATTACT ATATTAGGGG 
    ATATTTCTTC GTTGATATTC TTGTTGTAAT AAATCCATAT TGCCCAAGTC 
    ATCTTCTCTT GATTCACTCA GAAATGACTA TCGTTAGCTG GTAATTTTGG 
    TTATCATATG TCAGTTGGTC GAATTATGAC AACATATATA CGTAACTTAT 
    GACCAATAAG CTTGTTTTAA TTTTTTGTAT TTTATTAACG GTTGTGTTAC 
    CAAACCTTTT TATCTTGAAA AAATTCATAT GTTTTTAACT CTTTTTTTTT 
    CCAAACCAAT AAAAAAAAGG TTTTGACTTT AATGCATGAG GCCTTTTTGA 
    CATCCACTTA AAGCCATTGT

AT5G55080.1

Model type
Protein coding
Short Description
ras-related nuclear protein 4
Curator Summary
A member of RAN GTPase gene family.
Computational Description
ras-related nuclear protein 4 (RAN4); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAN GTPase 3 (TAIR:AT5G55190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G55090.1

Model type
Protein coding
Short Description
mitogen-activated protein kinase kinase kinase 15
Curator Summary
member of MEKK subfamily
Computational Description
mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR