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GT18660

CSHL Arabidopsis genetrap mutant lines

Original: GT18660

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18660

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9515501 [Map]; Strand: w
      • AT2G22425.1 - [+] show detail - Microsomal signal peptidase 12 kDa subunit (SPC12)
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: GT18660 - 5-prime edge 
    ATCGGAATCT TAATTATGAA TTGAATATTC TGGGTTGATT CTTATAATTA 
    TCTGTTTTTG CCAAAGGAAT TTGCTTTTGA ATCAATGGCT ATGGCTGTAA 
    TCTGGCAATT TCACTGAATT GTGTAGATTA TCTATCATCA GAGAGTTTTA 
    GATGAAAAAG TCTTATGAAT CACAAAAGTC TCAGTTTGTA TGAAAATGGT 
    ACATAAATAT CACACCATCC ATTTACACTC TGTGTTAAGC TTGTGTGCAA 
    AAACCAATGC TAGTCTTTGA TGCTTTGCTC CTTCTTATTT TCTTGAGTCG 
    AAGTAGAAAT AGTTTGTGTG ATTCCAAACT GTTCCGCTAG TCGCTGGTCA 
    GAGGATTTGC ACGGGTTCAT ATTCCGGGAG GTTCGAGTCA TCTGGCGAAT 
    GCGAACGCTT AAAAGTAGGT CATAGGCTTA TGAAACGAAA TGACAGTTGA 
    ATCAGCGAAC GCGTACAGGT TTGGAATCAG AATTTGAGAG AACCA

AT2G22425.1

Model type
Protein coding
Short Description
Microsomal signal peptidase 12 kDa subunit (SPC12)
Computational Description
Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, signal peptidase complex, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT4G40042.1); Has 315 Blast hits to 315 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 81; Plants - 67; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR