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GT19036

CSHL Arabidopsis genetrap mutant lines

Original: GT19036

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19036

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26026138 [Map]; Strand: c
      • AT1G69220.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G69220.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT19036 - 3-prime edge
    TTTTACCGAA CCGTTACCGA CCGTTTTCAT CCCTATATGG CGACTCTAAA 
    CCGTCGTCGC CGGGAGAGAG AGAAAGAGAG TCAGGCAAAG AGTAATACGT
    CTCGTCGTTA AAATTAATGA TGACAAATAA TTTTTAAAAA TTAGGAATGG
    GCCAACTAAA ATATTTTGCA AGCTGGAATA TTAATTTAAT TCTCTGTTTT
    GTCTATGACC TCTAAAGACA TTACTGTTTC TTGCATAATC TGTATAGGAT
    TCGATTGGTG AAATAAATCG GTAAAAAAAA ACTAACGATA TCAAAGACTG
    TTATCGTTCG AAAGACATAC AACAATTGAA GCACATATGC GTAGAAATTT
    AGAGATTATA CAGATTTTAT TTTTTGCTAG GGAACAAGAG GTTTCACAAA
    ATGATAGAAG TGTGACGTGG GATAAAGAAG ATAGAGTGAC CAAGTTGGCC
    TCAGTAGCTA GTTGCTACCA CCACCAAAGA GGTAATCAAG AGACGAGCCA
    CCTCCTGGAG CTGAGTGAAC CTTGGTCGAT GGTCGGTCCT GCGAACAACA
    ACCAAACAAG ATGTTTTAGT AACTGTACCA TAAGTTTTAG ACGATTATTG
    CGTTGTTAGC ACAAAGCAAA ACCCATCAGT CTATTTGATC TTCTTTCATT
    TTCAGACAAC TAATCTAAGA AAAGTAAAGA TACAGATGTT TTTGCTATCC
    GATAACCAGC ACACAGGACT CGATTCAGCG AAAGAATTAA AGACATACCG
    TGATGAAATT GCCTGTGTTT TGTCCTTCTG CACGCATGTA ATTGTTTGC

AT1G69220.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a putative serine/threonine kinase (SIK1).
Computational Description
SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 137554 Blast hits to 133946 proteins in 4802 species: Archae - 182; Bacteria - 16401; Metazoa - 51341; Fungi - 13391; Plants - 33553; Viruses - 570; Other Eukaryotes - 22116 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G69220.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Encodes a putative serine/threonine kinase (SIK1).
Computational Description
SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink).
Link
InterPro Scan - TAIR