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GT19369

CSHL Arabidopsis genetrap mutant lines

Original: GT19369

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19369

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22247679 [Map]; Strand: w
      • AT3G60190.1 - [+] show detail - DYNAMIN-like 1E
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT19369 - 5-prime edge
    TGTATCCTAT TAGCTAACCC AATCAAACTC TCCATAGTCG TCATCTTCCT 
    TCTCCTTCAG TTTCGGATGA GAGAATATAA AGTTCCAAAG ACGAAATTTT
    CAGTTCAGAA TTAGAAAGCT GCTTGAAAAT TCGCCAACAG ACCAAAGACT
    TCAAGAGCTG AGAGAGAGAG ACGAAGAAGA AAAATATTCG TAGGGGCAAA
    ATAGGAAAAT AAATTTAGAG AATAAATGTC TCTCTTTGAT TTCTAGAAGG
    TTTGATTTGT GTGCCTGTGG CTGTGTGGTT CGGTCGGTTT ACAGATAGCT
    TAGCCGCCGT TAAGGAGTCG TCTGGCTCTG GTTCGTTTTG GTTCGGTACG
    GACTGGTTCT TACTTTTCTA AACGGGCAAA TCTAAAATAA TGAAGATAAG
    ATTTGTGTCC CTTTAATTTG

AT3G60190.1

Model type
Protein coding
Short Description
DYNAMIN-like 1E
Curator Summary
At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central
Computational Description
DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink).
Link
InterPro Scan - TAIR