1. Home
  2. Mutant Lines
  3. GT19597

GT19597

CSHL Arabidopsis genetrap mutant lines

Original: GT19597

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19597

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19597 - 5-prime edge 
    GGGGGGGGGG GGGGGGGGGG GGGGAGGGGG GGGGGAGGGG GGGGGGGGGG 
    GGGGGGCGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13858398 [Map]; Strand: w
      • AT2G32670.1 - [+] show detail - vesicle-associated membrane protein 725
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT19597 - 5-prime edge 
    TGAGTCTCTT CATCTCACTC GACAAATATG ATTCTCTCTA AGCTTGAAAC 
    TCGCGTTACA ATAAGTTTCG GTTTAATCAA TGTCTATCTT GATCTCTATT 
    TTTTTTTTTG GCGGGGGGGG ATTCCAAAAG GGGTTTGGTA ATTTTTCTTT 
    TGGGAAAGAA AAAAAAAGGG TTTGGGGGGT TTGAAAAAAT TTGTGTTTTG 
    CCCCGAATTG GGGTGTTGGT TGTGAATCTT GTGGGGGGGA AATTTCTTTG 
    GGTTTTTTGG GGAGGGTTAA GGGAAATTTC CAACAAAAAA TTGGGGGGGG 
    GAAGGGTTAC CTTGGTCAAA CCAAAAGTTT AAAAAGAAGG GTGGGGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13858370 [Map]; Strand: w
      • AT2G32670.1 - [+] show detail - vesicle-associated membrane protein 725
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT19597 - 5-prime edge 
    TCATTTACCT CGTCGAGAAT GGCTTCAGTG AGTCTCTTCT TCTCTCTCGA 
    CCAGAATGAT TCTCTCTAAG CTTGAAACTC GCGTTACAAT ACGTTTCGGT 
    TTAATCAATG TCTATCTTGA TCTCTATTTT TTTTTTTGGA AAGGGGGAAT 
    TCAAAAATTG GTTTGGTAAT TTTATTTTTG GGAAAGAAAA AAAAAGGGTT 
    TGGGGGGGTG AAAAAAATTG GTGTTTAGCA GCGAATTGGG GTGTTGGTTT 
    TAAAATTGGG GGGGGGGAAA ATCCTTGGGT TTTTTTGGAA AAGGTTAAGG 
    GAAATTTTCA AAAAAAAATG GGGGGGGGAA AGGGTACCCC GGGTCAAGCC 
    AAAAGTTTAA AAAAAAAATT GGGGAAAAAA AAACTTGGCC GTAAAAAAAA 
    AAAAAAAAAA ATTTCCACCT TAAATTTTTG GGGGAAGGGT TAAAATTTTG 
    GGTGGACCCA GGGGCAAAAA TAAAGGAACA CAGGGAAAAT TGGGGGGAAC 
    ATCCCAAAAA AATTAAAAAA ACTGCCAAAA TTAAGG

AT2G32670.1

Model type
Protein coding
Short Description
vesicle-associated membrane protein 725
Curator Summary
member of Synaptobrevin -like protein family
Computational Description
vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink).
Link
InterPro Scan - TAIR