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GT19936

CSHL Arabidopsis genetrap mutant lines

Original: GT19936

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19936

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3321622 [Map]; Strand: w
      • AT3G10620.1 - [+] show detail - nudix hydrolase homolog 26
        Distance: 0; Region: exon6 (3UTR)
      • AT3G10630.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT19936 - 5-prime edge
    GCTCATCTCC AGTAGCAAAT AAATCGAAAA CTAAACTCTC TGTTTTAAGT 
    TTTTCGTAAG AAACTCTGAG AATAAGCTCT TCTTGACATA TTTGCTCTTT
    TTTGAACAAT CTTTGAATCA AAATACAATT CTTGTTCCCT CTCTTGATAA
    AAGTAAAGTG TGAGATCCTG TCATGTTCTT ATTTTCTCAT CAAAGATTCT
    CGCTATTTGA TCCGCTACAA CCTTAGCAAC AACCTCAGGA GCAAAATTCT
    TGACCATGTC ATCTCTTCCA CGTTTTCCTT TAACCTTAGC CTCATCAGGG
    TTACTCATTA CACGCCTCAT TAGAACCCTC AGCTTATCCA CAGATGGCTC
    TGCCCATTGA TGCCCTTCAA AAGGACCTTC CTTCACTTCA CTCATCTCCT
    CTACCACCAA CGGGTAACCA TTCCGCTCTG TAAGATACTC TGTTGGTCCT
    GACCAGTTTG TTGTGATCAC AGGCAAAGAC ATAGCCATGG CTTCCACTAT
    AGGTCGTCCC CATCCTTCTC CTCTTGTAGG CAACACAAAC GCATCAGCCG
    CTTTGTACAA CCGAGGTAAA TCAACTTGAG CAATGTGTTT ATCAATCACA
    TACACAAAAG GGTAACCATT CCGAGGCTCT TCTATATT

AT3G10620.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 26
Computational Description
nudix hydrolase homolog 26 (NUDX26); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 27 (TAIR:AT5G06340.1); Has 4741 Blast hits to 4739 proteins in 1213 species: Archae - 2; Bacteria - 2928; Metazoa - 13; Fungi - 1; Plants - 97; Viruses - 0; Other Eukaryotes - 1700 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10630.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); Has 3797 Blast hits to 3780 proteins in 938 species: Archae - 179; Bacteria - 2598; Metazoa - 0; Fungi - 1; Plants - 68; Viruses - 7; Other Eukaryotes - 944 (source: NCBI BLink).
Link
InterPro Scan - TAIR