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Mutant Lines
GT20061

GT20061

CSHL Arabidopsis genetrap mutant lines

Original: GT20061

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20061

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 28764948 [Map]; Strand: c
- AT1G76630.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon20 (CDS)
- AT1G76630.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon19 (CDS)

GCTTATCCAA GACTTTCCAA TATCTCCGAC AAGAAGGATC AGTGTGAATA 
GCCCTAATCA CCCATTTCTC AGGACTTTGG TAGTTTTCAA TCCCTGAAGT 
GGTTTCAGGT CTGTCTTCTG ATTGTCTTGC GAGTATATGC ATCTGGAAGT 
AAACTTCTGC AGGTCTCATT TCTGTCCAAC AATTAAAAAC AGTTTCAGTT 
ATGCAATTCT GGTGAAATAT GAAAGAACAA TGATTAGAAC AGTTTTTTCG 
TCAAACCTGG AGGCCAGCAG AACCATTCCA GACGAAGATT CTTCTCCCAT 
TTCTCTTTAG AGCCAAGACT TCCATGTGCT TGAGCTAATA ATGTATAAAC 
GATAGGCAAA GGAAACAATG AACTCGCTTG AACTTTGCTA AGACTTTTTA 
CAGCTAGTGA GAGAAACTGC GAGTCATTAG ACTGTCTAGC CAGCTCCATG 
CAGACAGCAC CATGGCAGAG AAGTAGACAG CTCTCTGAAT TTAACAACGA 
ACAAGCTTGT GCAAGGAATT CCTCTGCTGA GAAAAAGTCT TTTTTCCCTG 
TAGAATCTAA GCCACGAGCT AAACTGTATA CAGCCATCCA TTCTTTCCAT 
GAATTCTTC

AT1G76630.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 7905 Blast hits to 5237 proteins in 907 species: Archae - 493; Bacteria - 3636; Metazoa - 1081; Fungi - 415; Plants - 279; Viruses - 0; Other Eukaryotes - 2001 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G76630.2

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1).
Link: InterPro Scan - TAIR