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GT20147

CSHL Arabidopsis genetrap mutant lines

Original: GT20147

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20147

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5189528 [Map]; Strand: c
      • AT1G15080.1 - [+] show detail - lipid phosphate phosphatase 2
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: GT20147 - 3-prime edge
    ATCGACGAGA GACGTCCATG GAAATATCAG GAAGCAACAC GCGGGACACC 
    ACCCGTATGC TTGAGAACCG CTAAGTGAAG TCTTGTAAAG TCTTGTACTC
    GTTGTGACGT TATCTATCTT AGGCATTAAT ATGTATGGGC TTCTAATCAT
    AAGGCCCAAT ATTTGTTGGA AGCCCATTAG CTAAAAACAG AGCCCTATAA
    AGAGACAAAA AAAAGAATCG CTAGAAGGAG GGCTTGAACC TCCGACCTTG
    TGGTTAACAG CCACACGCTC TAGCCATCTG AGCTATTCCA GCTTTTTGAT
    TATCGTCTAA AGTAGTGATT ATATATACGC AGAATACCGG ACTGTGACAC
    CACATATAAA ATCACTAGAT TACATATTCC AATATAATTT CTGATAAATG
    TATATATTTT GTCTTTTGTT CAATGGCATT AACAAATTAT GTTACATCTT
    AATTTCTTCT
  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT20147 - 3-prime edge
    GGAACCCGAC CGGATCGGAT CGGTATATTT GTCTCTCTTG ACTA

AT1G15080.1

Model type
Protein coding
Short Description
lipid phosphate phosphatase 2
Curator Summary
Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.
Computational Description
lipid phosphate phosphatase 2 (LPP2); FUNCTIONS IN: acid phosphatase activity, phosphatidate phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.5); Has 2086 Blast hits to 2081 proteins in 377 species: Archae - 13; Bacteria - 320; Metazoa - 928; Fungi - 399; Plants - 199; Viruses - 3; Other Eukaryotes - 224 (source: NCBI BLink).
Link
InterPro Scan - TAIR