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GT20158

CSHL Arabidopsis genetrap mutant lines

Original: GT20158

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20158

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19289168 [Map]; Strand: w
      • AT2G46950.1 - [+] show detail - cytochrome P450, family 709, subfamily B, polypeptide 2
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: GT20158 - 3-prime edge 
    TTTACCGACC GTTACCAACC GATTTCATCC CTAATCAATG TAGTGTAATT 
    GACTTTCAAT AAGAAAGTGA CCAGTATAGT AAAGAAAAGA AAGATCTTCG 
    TTTACAAGGA GATGTAAACA TCTTATTTGT CCGGTCCGGT GCTCATTACA 
    CGTTGATTCA TGATTCAATG AAGAAATTTC TTCAATGAAA ATGCACAAGA 
    GAACAGCATA TAAATTAGTA ATTTCGCAAG TGAAAACGAA ATAAAATCAA 
    TAAAATACGG AATTGAGGAT CCACGTGATA AAGTTTGAAG AGGTGTGACG 
    GAGAAAAGTG TAAGCCACAT ACGACTATCC CTGCCTGCAC CACTAACTCT 
    CTTAACATTT ATTGTGTAAT TAATTTTGAG AATGATATAT CTCTGTTACT 
    TG

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT20158 - 3-prime edge 
    CCCGACCGGA GCGAATCGAA ATATTCTTCT CACTCGACTA GACGGTATCG 
    GAACCCAACC GG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19289255 [Map]; Strand: w
      • AT2G46950.1 - [+] show detail - cytochrome P450, family 709, subfamily B, polypeptide 2
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: GT20158 - 5-prime edge 
    TGATATTGTT AATAAATCAT TAGTAGGATG TGGATTTATC TGATGGTACA 
    TTGTTACCAA AATTCCTGAT CAATCTGACC GTAGGGTCTT TTGACCAGTC 
    GCTTTGACTT TACTCTTTGG CGCCTGATAT CCGAACACGT GTTACGTTAG 
    TTAGCAATTG ACGCCGTTAG TTGCCATCGT TAATGGGCTA GCCCAAATGA 
    TTCATAGTAA TATCCCAATA TCTTAATTAA GTCTCTTTAG CCCATGAAGG 
    TTCATATACA GAGTAGTGTA GAAGCATTTG CTTCAACCGT CGATAGGTTC 
    AAGTATCACA GGTAGATCGT ACTGAGGTTG AAGAGTGAGG TGATCCGCCG 
    GCGCATGTTT ATAATCGGCG GAGAGATTGA GCCGGAACCG TTGAAGAATC 
    ATGGCGAGAA CGGTCTTGGC TTCCATTATC GCAAAGTTTT GGCCAATGCA 
    AGCTCTTGGT CCCATTGAAA ACGCGAGGAG AGCGTTCGGA TGATTAGCGG 
    CCCGAGAAAG ACCGTTTGCA AACCGCATAG GGTTGAATTT GTCGGCGTCA 
    CTTCCCCAAA CGGCTTTGTC TCTGTGCATC TTCGCAATCG GGAGGATTAT 
    AGTCGTGCCT TTAGGGATCT CTAGGTTTCC TAATTTCATA TCTTCTGATG 
    CTAATCGGAG CAGATTTAAC ACTGGTCCGT ATAAACGAAG GGACTCCATA 
    AACACCGTGT TCATCTGCAA TGAT

AT2G46950.1

Model type
Protein coding
Short Description
cytochrome P450, family 709, subfamily B, polypeptide 2
Curator Summary
member of CYP709B
Computational Description
"cytochrome P450, family 709, subfamily B, polypeptide 2" (CYP709B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 3 (TAIR:AT4G27710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR