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GT20981

CSHL Arabidopsis genetrap mutant lines

Original: GT20981

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20981

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2869184 [Map]; Strand: w
      • AT3G09340.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT20981 - 5-prime edge
    GGTAAAACTG CGTGACCACT GAACCCAAAC CCGAATATCC CAATAGCGAC 
    GGGTAAGTTA GCGAGATCAA GAGCTTTTCC ACCCGTGTGA AACCCGACTC
    CATCAACCGA CCCAACCCAG AAGAGACAAA GAGCCAGCAA GATCGAAACA
    AAGACTCCTC CGGCTAAAAG AATGGAACAC ACATATTAAA GAATATATGA
    ACGAATCTCG AAGCTATATT GGAAGGATCT TATGATCATT TATATAGAAA
    ATGGAACCTG AGAGATAGGA GAGTAAGCTA AGGTCTTTGA GCCAAACTGT
    AGGAAGAACA ATAAGAGTAG CTGATATAGC AAAGATCTGA GAAGAATCTA
    GAGATACTCC AACGATGTTT AATGTAATGT TGGGGAAAAC TCTCGATAAA
    TTATCGCTCA TCATGATTAT ATACTCCACA CAACATACGT ATAACTCCAT
    GTACAGAAGT ATCTGCAACT CTCAGCAGAG ATCAAGAACC CTAAATATTA
    GTTTGGAGAT ATGTGAAGTA TATATGTAAA TCATTTCCAT ATAACTCACG
    GAGATGATGA GGCGGCCTGT AAATCCAAAG GCAGCTTGAC CAATGTCCGG
    GTAGGTACGG AGATCAGAAG AGCTCTCAAG ACATCGTTTG AGGAGGATAC
    CAGTGTAGCA AGTGATGATA GCAAAGGATA AGAGTATACA AAGCCCGAGC
    CATCCTCCTT CTTTCCGCGC GTAAGGCATT GTGAGTAGAC TTATTCCACA
    AAGGACATTG ATTCCTTCAC CAA

AT3G09340.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G09330.1); Has 5037 Blast hits to 4989 proteins in 303 species: Archae - 8; Bacteria - 84; Metazoa - 1819; Fungi - 980; Plants - 1422; Viruses - 9; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR