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GT21009

CSHL Arabidopsis genetrap mutant lines

Original: GT21009

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21009

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23102615 [Map]; Strand: w
      • AT3G62455.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT21009 - 5-prime edge 
    GCTTTATTCG TCTCTGTTCA GGAATATGAA CATGACCAAC TGACCCAAAA 
    ATTCTGAAAT AATCAACCTT TGGTTTGATT CCCGACCATT TTTCTTCAGG 
    CACCATGTCT TTGACTGACC TTGTGAAACT TCGATTTAAC ACATGAGCAG 
    TCCACTTAGC AGCTTCTGGC CAAAAAGATC TCGGCATTTC CTTCTCAGAC 
    AGCAAACAAC GAACCATATT CATGATTGTT CTGTTTCATC TCACTCGA

AT3G62455.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 7.1e-232 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)
Link
InterPro Scan - TAIR